| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g24369 | 3:12,365,371-12,373,037 | - | C2H3g19566 | CX3g028360 | LOC_Os03g24460 | Os03g0359100 | - | Detail |
| C1H3g29038 | 3:12,377,550-12,377,741 | + | C2H3g07837 | - | - | - | - | Detail |
| C1H3g24260 | 3:12,383,588-12,384,238 | + | C2H3g30335 | CX3g028005 | LOC_Os03g24560 | Os03g0360300 | - | Detail |
| C1H3g06016 | 3:12,386,614-12,389,433 | + | C2H3g23651 | CX3g026622 | - | Os03g0202500 | - | Detail |
| C1H3g10908 | 3:12,396,508-12,400,297 | - | C2H3g11576 | CX3g025165 | LOC_Os03g24520 | Os03g0359700 | - | Detail |
| C1H3g04236 | 3:12,404,888-12,409,153 | - | C2H3g27563 | CX3g029301 | LOC_Os03g24580 | Os03g0360500 | - | Detail |
| C1H3g00317 | 3:12,416,055-12,419,546 | + | C2H3g30143 | CX3g028418 | LOC_Os03g24600 | Os03g0360700 | OsMSRB5 | Detail |
| C1H3g00810 | 3:12,421,170-12,424,797 | + | C2H3g18552 | CX3g030502 | LOC_Os03g24610 | Os03g0360800 | - | Detail |
| C1H3g25268 | 3:12,437,244-12,439,620 | + | C2H3g08848 | CX3g028479 | LOC_Os03g24640 | Os03g0361100 | - | Detail |
| C1H3g10968 | 3:12,448,892-12,451,889 | + | C2H3g01009 | CX3g028091 | LOC_Os03g24640 | Os03g0361100 | - | Detail |
| C1H3g06434 | 3:12,460,169-12,462,089 | - | C2H3g10773 | CX3g028227 | LOC_Os03g24650 | Os03g0361700 | - | Detail |
| C1H3g24193 | 3:12,486,048-12,491,848 | + | C2H3g13152 | CX3g028193 | LOC_Os03g24680 | Os03g0361600 | - | Detail |
| C1H3g23561 | 3:12,556,284-12,559,090 | - | C2H3g09511 | - | - | - | - | Detail |
| C1H3g19660 | 3:12,561,774-12,562,895 | - | C2H3g25785 | CX3g028363 | LOC_Os03g24690 | Os03g0361700 | - | Detail |
| C1H3g14470 | 3:12,563,290-12,565,007 | - | C2H3g04211 | CX3g028363 | LOC_Os03g24690 | Os03g0361700 | - | Detail |
| C1H3g07323 | 3:12,596,798-12,600,876 | + | C2H3g17100 | CX3g028193 | LOC_Os03g24760 | Os03g0362500 | - | Detail |
| C1H3g15261 | 3:12,603,728-12,604,306 | - | C2H3g08257 | CX3g028041 | LOC_Os03g24690 | Os03g0361700 | - | Detail |
| C1H3g26242 | 3:12,605,921-12,606,196 | - | C2H3g08257 | CX3g028041 | LOC_Os03g24690 | Os03g0361700 | - | Detail |
| C1H3g19204 | 3:12,630,350-12,633,647 | + | C2H3g24954 | CX3g029989 | LOC_Os03g24730 | Os03g0362200 | - | Detail |
| C1H3g31305 | 3:12,645,787-12,648,421 | + | C2H3g21455 | CX3g027415 | LOC_Os03g24820 | Os03g0363100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g17854 | 5:1,986,365-1,989,105 | + | C1H5g06617 | CX5g041028 | LOC_Os05g04850 | Os05g0140500 | OsY14a, Y14a, Tsunagi, RBM8 | Detail |
| C2H5g11120 | 5:1,990,448-1,994,019 | - | C1H5g27337 | CX5g037434 | LOC_Os05g04860 | Os05g0140600 | - | Detail |
| C2H5g05137 | 5:2,001,205-2,002,595 | - | C1H5g07901 | CX5g037644 | LOC_Os05g04870 | Os05g0140800 | - | Detail |
| C2H5g05092 | 5:2,008,868-2,015,794 | - | C1H5g21345 | CX5g040189 | LOC_Os05g04890 | Os05g0141000 | - | Detail |
| C2H5g10662 | 5:2,018,192-2,023,935 | - | C1H5g19698 | CX5g039228 | LOC_Os05g04914 | Os05g0141200 | - | Detail |
| C2H5g22940 | 5:2,033,817-2,036,843 | - | C1H5g02890 | CX5g039514 | LOC_Os05g04940 | Os05g0141400 | - | Detail |
| C2H5g29281 | 5:2,037,481-2,042,234 | - | C1H5g01265 | CX5g037614 | LOC_Os05g04950 | Os05g0141500 | - | Detail |
| C2H5g24711 | 5:2,048,918-2,058,412 | + | C1H5g28545 | CX5g037763 | LOC_Os05g04960 | Os05g0141700 | - | Detail |
| C2H5g02199 | 5:2,132,041-2,135,781 | + | C1H5g21606 | CX5g040648 | LOC_Os05g05130 | Os05g0143200 | - | Detail |
| C2H5g18500 | 5:2,136,267-2,139,691 | - | C1H5g00987 | CX5g038230 | LOC_Os05g05140 | Os05g0143300 | - | Detail |
| C2H5g21384 | 5:2,142,781-2,145,032 | + | C1H5g04744 | CX5g036859 | LOC_Os05g05150 | Os05g0143400 | - | Detail |
| C2H5g29296 | 5:2,147,926-2,155,281 | + | C1H5g27457 | CX5g036917 | LOC_Os05g05160 | Os05g0143500 | - | Detail |
| C2H5g22685 | 5:2,160,044-2,163,492 | - | C1H5g10365 | CX5g037961 | LOC_Os05g05180 | Os05g0143800 | - | Detail |
| C2H5g06932 | 5:2,167,178-2,174,537 | - | C1H5g29191 | CX5g037824 | LOC_Os05g05200 | Os05g0144000 | - | Detail |
| C2H5g15662 | 5:2,175,094-2,179,031 | + | C1H5g02281 | CX5g039026 | LOC_Os05g05210 | Os05g0144100 | - | Detail |
| C2H5g20065 | 5:2,180,104-2,184,321 | - | C1H5g15096 | CX5g038093 | LOC_Os05g05220 | Os05g0144200 | - | Detail |
| C2H5g11901 | 5:2,185,751-2,196,021 | - | C1H5g19739 | CX5g040491 | LOC_Os05g05230 | Os05g0144300 | OsCHR719, CHR719 | Detail |
| C2H5g11499 | 5:2,199,620-2,208,484 | + | C1H5g01986 | CX5g040168 | LOC_Os05g05240 | Os05g0144400 | OsPPKL2 | Detail |
| C2H5g14473 | 5:2,214,177-2,219,891 | - | C1H5g16759 | CX5g037072 | LOC_Os05g05260 | Os05g0144800 | - | Detail |
| C2H5g09730 | 5:2,225,114-2,228,156 | + | C1H5g20568 | CX5g039685 | LOC_Os05g05270 | Os05g0144900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |