| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11764 | 3:10,956,693-10,961,163 | - | C2H3g10583 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C1H3g02450 | 3:10,968,065-10,973,057 | + | C2H3g24190 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C1H3g13994 | 3:10,973,249-10,978,463 | - | C2H3g30311 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C1H3g12459 | 3:10,978,644-10,988,938 | + | C2H3g26938 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C1H3g29664 | 3:10,990,193-10,992,877 | + | C2H3g19269 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C1H3g30788 | 3:10,997,102-11,001,582 | + | C2H3g24047 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C1H3g06087 | 3:11,002,110-11,002,616 | + | C2H3g24886 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C1H3g12764 | 3:11,005,642-11,009,575 | - | C2H3g01911 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C1H3g24732 | 3:11,012,916-11,019,204 | + | C2H3g06072 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C1H3g12242 | 3:11,021,498-11,024,991 | + | C2H3g19486 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C1H3g12872 | 3:11,025,887-11,026,351 | - | C2H3g01471 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C1H3g04089 | 3:11,049,298-11,055,428 | + | C2H3g23114 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C1H3g19863 | 3:11,055,512-11,060,664 | - | C2H3g29675 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C1H3g05344 | 3:11,063,303-11,064,574 | + | C2H3g22866 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C1H3g04080 | 3:11,069,158-11,070,960 | + | C2H3g03886 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C1H3g28568 | 3:11,077,899-11,078,735 | - | - | - | - | - | - | Detail |
| C1H3g16339 | 3:11,078,444-11,078,689 | + | C2H3g08004 | CX3g030092 | - | Os07g0676800 | - | Detail |
| C1H3g19042 | 3:11,081,184-11,087,685 | + | C2H3g20974 | CX3g026559 | LOC_Os03g21720 | Os03g0335300 | - | Detail |
| C1H3g07741 | 3:11,090,089-11,093,974 | + | C2H3g19361 | CX3g030985 | LOC_Os03g21730 | Os03g0335500 | - | Detail |
| C1H3g12959 | 3:11,104,908-11,115,051 | - | C2H3g14995 | CX3g025822 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00465 | 4:21,949,305-21,949,736 | - | C1H4g16892 | - | LOC_Os04g42850 | - | - | Detail |
| C2H4g23428 | 4:21,955,992-21,961,795 | + | C1H4g02011 | CX4g033250 | LOC_Os04g42860 | Os04g0507700 | - | Detail |
| C2H4g12434 | 4:21,962,396-21,964,296 | - | C1H4g25437 | CX4g036242 | LOC_Os04g42870 | Os04g0507800 | - | Detail |
| C2H4g04255 | 4:21,964,471-21,966,166 | + | C1H4g05518 | CX4g032853 | LOC_Os04g42880 | Os04g0507900 | - | Detail |
| C2H4g13577 | 4:21,969,979-21,970,602 | - | - | CX4g035638 | LOC_Os04g42889 | - | - | Detail |
| C2H4g02916 | 4:21,971,608-21,974,671 | - | C1H4g12307 | CX4g033139 | LOC_Os04g42900 | Os04g0508000 | - | Detail |
| C2H4g04232 | 4:21,975,336-21,978,353 | + | C1H4g06876 | CX4g032690 | LOC_Os04g42910 | Os04g0508100 | - | Detail |
| C2H4g05860 | 4:21,979,292-21,984,831 | + | C1H4g08533 | CX4g033875 | LOC_Os04g42920 | Os04g0508200 | - | Detail |
| C2H4g05577 | 4:21,986,204-21,988,757 | + | C1H4g17316 | CX4g035105 | LOC_Os04g42930 | Os04g0508300 | OsGrxC2.2 | Detail |
| C2H4g08577 | 4:21,989,395-21,990,537 | - | - | CX4g036552 | LOC_Os04g42940 | Os04g0508400 | - | Detail |
| C2H4g24307 | 4:21,993,729-21,995,690 | - | C1H4g28976 | CX4g036081 | LOC_Os04g42950 | Os04g0508500 | Os2R_MYB45 | Detail |
| C2H4g01800 | 4:22,005,104-22,006,447 | + | C1H2g19268 | CX4g034855 | LOC_Os04g42960 | Os04g0508600 | - | Detail |
| C2H4g15606 | 4:22,010,532-22,014,498 | - | C1H4g09744 | CX4g031554 | LOC_Os04g42980 | Os04g0508800 | - | Detail |
| C2H4g18756 | 4:22,019,614-22,023,317 | - | C1H4g09860 | CX4g035042 | LOC_Os04g42990 | Os04g0508900 | - | Detail |
| C2H4g21092 | 4:22,032,568-22,038,012 | + | C1H4g03726 | CX4g031481 | LOC_Os04g43020 | Os04g0509000 | - | Detail |
| C2H4g17989 | 4:22,038,821-22,046,565 | + | C1H4g25656 | CX4g035238 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C2H4g25209 | 4:22,046,130-22,049,928 | - | C1H4g05629 | CX4g036052 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| C2H4g20441 | 4:22,052,563-22,073,010 | - | C1H4g11981 | CX4g034232 | LOC_Os04g43050 | Os04g0509300 | DCL4, OsDCL4, Os DCL4, Dcl4 | Detail |
| C2H4g11339 | 4:22,075,791-22,076,232 | + | C1H4g16776 | CX4g036588 | LOC_Os04g43060 | Os04g0509400 | - | Detail |
| C2H4g01906 | 4:22,082,684-22,084,180 | + | C1H4g16652 | CX2g024932 | LOC_Os04g43070 | Os04g0509600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |