| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11764 | 3:10,956,693-10,961,163 | - | C2H3g10583 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C1H3g02450 | 3:10,968,065-10,973,057 | + | C2H3g24190 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C1H3g13994 | 3:10,973,249-10,978,463 | - | C2H3g30311 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C1H3g12459 | 3:10,978,644-10,988,938 | + | C2H3g26938 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C1H3g29664 | 3:10,990,193-10,992,877 | + | C2H3g19269 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C1H3g30788 | 3:10,997,102-11,001,582 | + | C2H3g24047 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C1H3g06087 | 3:11,002,110-11,002,616 | + | C2H3g24886 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C1H3g12764 | 3:11,005,642-11,009,575 | - | C2H3g01911 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C1H3g24732 | 3:11,012,916-11,019,204 | + | C2H3g06072 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C1H3g12242 | 3:11,021,498-11,024,991 | + | C2H3g19486 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C1H3g12872 | 3:11,025,887-11,026,351 | - | C2H3g01471 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C1H3g04089 | 3:11,049,298-11,055,428 | + | C2H3g23114 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C1H3g19863 | 3:11,055,512-11,060,664 | - | C2H3g29675 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C1H3g05344 | 3:11,063,303-11,064,574 | + | C2H3g22866 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C1H3g04080 | 3:11,069,158-11,070,960 | + | C2H3g03886 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C1H3g28568 | 3:11,077,899-11,078,735 | - | - | - | - | - | - | Detail |
| C1H3g16339 | 3:11,078,444-11,078,689 | + | C2H3g08004 | CX3g030092 | - | Os07g0676800 | - | Detail |
| C1H3g19042 | 3:11,081,184-11,087,685 | + | C2H3g20974 | CX3g026559 | LOC_Os03g21720 | Os03g0335300 | - | Detail |
| C1H3g07741 | 3:11,090,089-11,093,974 | + | C2H3g19361 | CX3g030985 | LOC_Os03g21730 | Os03g0335500 | - | Detail |
| C1H3g12959 | 3:11,104,908-11,115,051 | - | C2H3g14995 | CX3g025822 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g00917 | 6:12,414,263-12,416,024 | + | C1H6g09958 | CX6g043058 | - | - | - | Detail |
| C2H6g06328 | 6:12,414,277-12,417,983 | - | C1H6g04962 | CX6g042140 | - | Os06g0476150 | - | Detail |
| C2H6g27704 | 6:12,419,167-12,441,829 | + | C1H6g07235 | CX6g042614 | LOC_Os06g28194 | Os06g0476200 | - | Detail |
| C2H6g29114 | 6:12,512,979-12,513,587 | - | - | CX6g042924 | - | - | - | Detail |
| C2H6g18534 | 6:12,524,722-12,525,096 | - | - | CX6g041498 | LOC_Os06g28340 | - | - | Detail |
| C2H6g06695 | 6:12,535,492-12,537,043 | - | C1H6g14358 | CX6g045181 | - | - | - | Detail |
| C2H6g23735 | 6:12,584,977-12,586,903 | + | C1H6g16245 | CX6g043504 | LOC_Os06g28390 | - | - | Detail |
| C2H6g17949 | 6:12,648,588-12,649,892 | + | C1H6g08613 | CX6g042631 | LOC_Os06g28480 | Os06g0478600 | - | Detail |
| C2H6g17612 | 6:12,778,201-12,779,577 | - | C1H6g06275 | - | LOC_Os06g27680 | - | - | Detail |
| C2H6g22321 | 6:12,790,891-12,797,546 | - | C1H6g19614 | - | LOC_Os06g27650 | Os06g0470800 | - | Detail |
| C2H6g02459 | 6:12,799,411-12,800,363 | - | C1H6g21380 | - | LOC_Os06g27650 | Os06g0470800 | - | Detail |
| C2H6g26556 | 6:12,834,829-12,837,003 | + | C1H6g03016 | CX6g041636 | LOC_Os06g27610 | - | - | Detail |
| C2H6g21506 | 6:12,916,529-12,918,876 | - | C1H6g16510 | CX6g043492 | LOC_Os06g27560 | Os06g0470000 | - | Detail |
| C2H6g17184 | 6:13,044,184-13,045,335 | + | - | CX6g044224 | LOC_Os06g27370 | Os06g0468400 | - | Detail |
| C2H6g21788 | 6:13,131,287-13,140,110 | + | C1H6g11308 | CX6g042542 | LOC_Os06g26340 | Os06g0367900 | - | Detail |
| C2H6g14865 | 6:13,131,441-13,133,570 | - | - | - | - | - | - | Detail |
| C2H6g12309 | 6:13,326,912-13,327,551 | - | - | CX6g044909 | LOC_Os06g26270 | Os06g0367500 | - | Detail |
| C2H6g19121 | 6:13,331,036-13,332,842 | - | C1H6g09461 | CX6g044909 | LOC_Os06g26270 | Os06g0367500 | - | Detail |
| C2H6g29278 | 6:13,369,055-13,392,150 | - | C1H6g29971 | CX6g044904 | LOC_Os06g26234 | Os06g0367100 | - | Detail |
| C2H6g05723 | 6:13,434,893-13,435,901 | - | C1H6g16217 | - | LOC_Os06g25950 | Os06g0364500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |