| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16001 | 3:10,173,735-10,175,036 | + | C2H3g05954 | CX3g026260 | LOC_Os03g20230 | Os03g0318400 | - | Detail |
| C1H3g07890 | 3:10,192,334-10,193,545 | + | C2H3g08312 | CX3g025491 | LOC_Os03g20230 | Os03g0317900 | - | Detail |
| C1H3g20479 | 3:10,200,586-10,201,880 | + | C2H3g29183 | CX3g028957 | LOC_Os03g20290 | Os03g0318400 | - | Detail |
| C1H3g31254 | 3:10,203,377-10,209,318 | - | C2H3g10315 | CX3g024974 | LOC_Os03g20300 | Os03g0318500 | - | Detail |
| C1H3g27797 | 3:10,209,753-10,214,845 | - | C2H3g15586 | CX3g025701 | LOC_Os03g20310 | Os03g0318600 | OsTGA3 | Detail |
| C1H3g25597 | 3:10,233,111-10,233,644 | + | C2H3g06773 | CX3g031095 | LOC_Os03g20330 | Os03g0319000 | - | Detail |
| C1H3g29099 | 3:10,242,233-10,246,996 | + | C2H3g23539 | CX3g030494 | LOC_Os03g20340 | Os03g0319100 | - | Detail |
| C1H3g19829 | 3:10,254,192-10,255,623 | + | C2H3g28901 | CX3g028434 | LOC_Os03g20350 | Os03g0319200 | - | Detail |
| C1H3g23043 | 3:10,259,154-10,260,436 | + | C2H3g27412 | CX3g031077 | LOC_Os03g20370 | Os03g0319300 | OsCam1-1, OsCaM1-1, OsCaM1 | Detail |
| C1H3g21490 | 3:10,262,867-10,268,355 | - | C2H3g25279 | CX3g026317 | LOC_Os03g20380 | Os03g0319400 | - | Detail |
| C1H3g25971 | 3:10,281,082-10,284,619 | - | C2H3g09371 | CX3g025212 | LOC_Os03g20410 | Os03g0320000 | OsSIP2 | Detail |
| C1H3g08252 | 3:10,290,492-10,298,627 | - | C2H3g22340 | CX3g029293 | LOC_Os03g20420 | Os03g0320100 | - | Detail |
| C1H3g09342 | 3:10,303,100-10,304,444 | + | C2H3g01972 | CX3g029244 | LOC_Os03g20430 | Os03g0320400 | - | Detail |
| C1H3g07396 | 3:10,310,058-10,310,714 | - | C2H3g13875 | CX3g027813 | LOC_Os03g20440 | Os03g0320600 | - | Detail |
| C1H3g21035 | 3:10,326,442-10,331,578 | + | C2H3g23140 | CX3g030303 | LOC_Os03g20450 | Os03g0320800 | - | Detail |
| C1H3g22135 | 3:10,334,633-10,337,401 | + | C2H3g14660 | CX3g027683 | LOC_Os03g20460 | Os03g0320900 | V2, pt/mtGK | Detail |
| C1H3g27273 | 3:10,338,765-10,341,238 | + | C2H3g12919 | CX3g026494 | LOC_Os03g20470 | Os03g0321000 | - | Detail |
| C1H3g19861 | 3:10,351,468-10,352,613 | + | C2H3g01230 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C1H3g31579 | 3:10,352,696-10,352,992 | - | C2H3g17781 | - | - | - | - | Detail |
| C1H3g05314 | 3:10,360,363-10,366,269 | - | C2H3g10177 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g04717 | 4:24,611,743-24,626,944 | - | C1H4g04331 | CX4g033771 | LOC_Os04g48040 | Os04g0568850 | - | Detail |
| C2H4g27476 | 4:24,628,324-24,631,531 | - | C1H4g22901 | CX4g035675 | LOC_Os04g48050 | Os04g0568900 | OsRINGzf1 | Detail |
| C2H4g06051 | 4:24,639,426-24,642,258 | + | C1H4g15838 | CX4g036264 | LOC_Os04g48060 | Os04g0569000 | OsRFC4 | Detail |
| C2H4g02683 | 4:24,643,492-24,649,194 | - | C1H4g17902 | CX4g033862 | LOC_Os04g48070 | Os04g0569100 | ROC4, Roc4 | Detail |
| C2H4g16788 | 4:24,662,482-24,663,894 | + | C1H4g21535 | CX4g035902 | LOC_Os04g48130 | Os04g0569300 | - | Detail |
| C2H4g20649 | 4:24,664,480-24,668,620 | - | C1H4g08980 | CX4g031968 | LOC_Os04g48140 | Os04g0569400 | - | Detail |
| C2H4g00953 | 4:24,680,139-24,682,701 | - | C1H4g04673 | CX4g034977 | LOC_Os04g48160 | Os04g0569900 | - | Detail |
| C2H4g17853 | 4:24,691,650-24,695,483 | - | C1H4g18526 | CX4g033784 | LOC_Os04g48170 | Os04g0570000 | CYP87A3 | Detail |
| C2H4g14427 | 4:24,713,054-24,724,810 | - | C1H4g29930 | CX4g031367 | LOC_Os04g48200 | Os04g0570500 | - | Detail |
| C2H4g22883 | 4:24,725,688-24,725,969 | - | C1H4g29930 | CX4g031367 | LOC_Os04g48200 | Os04g0570600 | - | Detail |
| C2H4g06266 | 4:24,729,155-24,733,008 | - | C1H4g03867 | CX4g033156 | LOC_Os04g48230 | Os04g0570800 | - | Detail |
| C2H4g17221 | 4:24,745,123-24,747,689 | + | C1H4g26163 | CX4g033503 | LOC_Os04g48260 | Os04g0571200 | OsSIRH2-14, OsRFPH2-14 | Detail |
| C2H4g10186 | 4:24,752,021-24,754,484 | + | C1H4g03569 | CX4g033945 | LOC_Os04g48270 | Os04g0571300 | - | Detail |
| C2H4g15919 | 4:24,775,741-24,777,423 | + | C1H4g23534 | CX4g036434 | LOC_Os04g48290 | Os04g0571600 | - | Detail |
| C2H4g00338 | 4:24,794,171-24,796,228 | + | C1H4g17435 | CX4g036388 | LOC_Os04g48310 | Os04g0571800 | - | Detail |
| C2H4g12960 | 4:24,809,241-24,809,861 | + | C1H4g06177 | CX4g036221 | LOC_Os04g48330 | Os04g0572200 | - | Detail |
| C2H4g16947 | 4:24,828,508-24,829,167 | + | C1H4g06177 | CX4g033927 | LOC_Os04g48350 | Os04g0572400 | OsDREB1E | Detail |
| C2H4g15443 | 4:24,834,789-24,837,653 | + | C1H4g03855 | - | LOC_Os04g48360 | Os04g0572500 | - | Detail |
| C2H4g29441 | 4:24,840,867-24,855,980 | + | C1H4g24679 | CX4g034848 | LOC_Os04g48370 | Os04g0572600 | OsNRPD1a, OsNRPD1 | Detail |
| C2H4g24575 | 4:24,858,227-24,862,081 | + | C1H4g25752 | CX2g023056 | LOC_Os04g48375 | Os04g0572700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |