| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16001 | 3:10,173,735-10,175,036 | + | C2H3g05954 | CX3g026260 | LOC_Os03g20230 | Os03g0318400 | - | Detail |
| C1H3g07890 | 3:10,192,334-10,193,545 | + | C2H3g08312 | CX3g025491 | LOC_Os03g20230 | Os03g0317900 | - | Detail |
| C1H3g20479 | 3:10,200,586-10,201,880 | + | C2H3g29183 | CX3g028957 | LOC_Os03g20290 | Os03g0318400 | - | Detail |
| C1H3g31254 | 3:10,203,377-10,209,318 | - | C2H3g10315 | CX3g024974 | LOC_Os03g20300 | Os03g0318500 | - | Detail |
| C1H3g27797 | 3:10,209,753-10,214,845 | - | C2H3g15586 | CX3g025701 | LOC_Os03g20310 | Os03g0318600 | OsTGA3 | Detail |
| C1H3g25597 | 3:10,233,111-10,233,644 | + | C2H3g06773 | CX3g031095 | LOC_Os03g20330 | Os03g0319000 | - | Detail |
| C1H3g29099 | 3:10,242,233-10,246,996 | + | C2H3g23539 | CX3g030494 | LOC_Os03g20340 | Os03g0319100 | - | Detail |
| C1H3g19829 | 3:10,254,192-10,255,623 | + | C2H3g28901 | CX3g028434 | LOC_Os03g20350 | Os03g0319200 | - | Detail |
| C1H3g23043 | 3:10,259,154-10,260,436 | + | C2H3g27412 | CX3g031077 | LOC_Os03g20370 | Os03g0319300 | OsCam1-1, OsCaM1-1, OsCaM1 | Detail |
| C1H3g21490 | 3:10,262,867-10,268,355 | - | C2H3g25279 | CX3g026317 | LOC_Os03g20380 | Os03g0319400 | - | Detail |
| C1H3g25971 | 3:10,281,082-10,284,619 | - | C2H3g09371 | CX3g025212 | LOC_Os03g20410 | Os03g0320000 | OsSIP2 | Detail |
| C1H3g08252 | 3:10,290,492-10,298,627 | - | C2H3g22340 | CX3g029293 | LOC_Os03g20420 | Os03g0320100 | - | Detail |
| C1H3g09342 | 3:10,303,100-10,304,444 | + | C2H3g01972 | CX3g029244 | LOC_Os03g20430 | Os03g0320400 | - | Detail |
| C1H3g07396 | 3:10,310,058-10,310,714 | - | C2H3g13875 | CX3g027813 | LOC_Os03g20440 | Os03g0320600 | - | Detail |
| C1H3g21035 | 3:10,326,442-10,331,578 | + | C2H3g23140 | CX3g030303 | LOC_Os03g20450 | Os03g0320800 | - | Detail |
| C1H3g22135 | 3:10,334,633-10,337,401 | + | C2H3g14660 | CX3g027683 | LOC_Os03g20460 | Os03g0320900 | V2, pt/mtGK | Detail |
| C1H3g27273 | 3:10,338,765-10,341,238 | + | C2H3g12919 | CX3g026494 | LOC_Os03g20470 | Os03g0321000 | - | Detail |
| C1H3g19861 | 3:10,351,468-10,352,613 | + | C2H3g01230 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C1H3g31579 | 3:10,352,696-10,352,992 | - | C2H3g17781 | - | - | - | - | Detail |
| C1H3g05314 | 3:10,360,363-10,366,269 | - | C2H3g10177 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g24093 | 1:2,537,567-2,538,270 | + | C1H1g29973 | CX1g007242 | LOC_Os01g06310 | Os01g0155800 | - | Detail |
| C2H1g22515 | 1:2,540,032-2,541,637 | - | C1H1g13454 | CX1g007185 | LOC_Os01g06320 | Os01g0156000 | - | Detail |
| C2H1g04001 | 1:2,545,948-2,546,520 | - | C1H1g25315 | - | LOC_Os01g06340 | Os01g0156300 | PBI1 | Detail |
| C2H1g08945 | 1:2,577,968-2,578,513 | + | - | - | LOC_Os01g06400 | Os01g0157200 | - | Detail |
| C2H1g04979 | 1:2,578,592-2,579,914 | + | - | CX1g003956 | LOC_Os01g06420 | Os01g0157400 | - | Detail |
| C2H1g03861 | 1:2,580,945-2,581,535 | - | - | CX1g004586 | LOC_Os01g06430 | Os01g0157500 | - | Detail |
| C2H1g11420 | 1:2,581,971-2,582,867 | + | - | CX1g003956 | LOC_Os01g06440 | Os01g0157600 | - | Detail |
| C2H1g13739 | 1:2,583,605-2,585,554 | + | C1H1g06191 | CX1g005459 | LOC_Os01g06450 | Os01g0157700 | OsGT43D | Detail |
| C2H1g20509 | 1:2,585,823-2,587,407 | - | C1H1g08756 | CX1g003933 | LOC_Os01g06454 | Os01g0157800 | - | Detail |
| C2H1g01428 | 1:2,588,820-2,590,961 | + | C1H1g28779 | CX1g005952 | LOC_Os01g06460 | Os01g0157900 | - | Detail |
| C2H1g03652 | 1:2,591,620-2,596,311 | + | C1H1g22633 | CX1g006260 | LOC_Os01g06470 | Os01g0158000 | - | Detail |
| C2H1g01926 | 1:2,596,560-2,597,339 | - | - | CX1g002806 | - | Os01g0158100 | - | Detail |
| C2H1g08414 | 1:2,598,708-2,601,340 | + | C1H1g19862 | CX1g001022 | LOC_Os01g06490 | Os01g0158200 | - | Detail |
| C2H1g03967 | 1:2,605,627-2,606,572 | - | C1H1g26742 | CX1g003666 | LOC_Os01g06500 | Os01g0158400 | - | Detail |
| C2H1g25638 | 1:2,608,288-2,613,518 | + | C1H1g07220 | CX1g000174 | LOC_Os01g06510 | Os01g0158500 | - | Detail |
| C2H1g30481 | 1:2,614,602-2,618,390 | - | C1H1g25336 | CX1g004872 | LOC_Os01g06520 | Os01g0158600 | - | Detail |
| C2H1g17033 | 1:2,634,762-2,639,368 | - | C1H1g12071 | CX1g004323 | LOC_Os01g06540 | Os01g0158800 | - | Detail |
| C2H1g28220 | 1:2,640,018-2,645,480 | - | C1H1g18412 | CX1g003560 | LOC_Os01g06550 | Os01g0158900 | - | Detail |
| C2H1g07454 | 1:2,646,314-2,647,599 | - | C1H1g02740 | CX1g003324 | LOC_Os01g06560 | Os01g0159000 | OsDOG1L-1 | Detail |
| C2H1g26326 | 1:2,648,901-2,650,044 | - | C1H1g14011 | - | - | Os01g0298301 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |