| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g03995 | 3:9,193,090-9,196,256 | + | C2H3g04518 | CX3g027883 | LOC_Os03g18510 | Os03g0296400 | - | Detail |
| C1H3g15230 | 3:9,196,980-9,199,648 | + | C2H3g25990 | CX3g027567 | LOC_Os03g18520 | Os03g0296500 | - | Detail |
| C1H3g03574 | 3:9,200,402-9,200,851 | + | C2H3g19945 | CX3g030647 | LOC_Os03g18530 | Os03g0296600 | FEB1 | Detail |
| C1H3g02938 | 3:9,201,770-9,205,717 | + | C2H3g00640 | CX3g027501 | LOC_Os03g18540 | Os03g0296700 | - | Detail |
| C1H3g26064 | 3:9,208,464-9,211,509 | + | C2H3g07011 | CX3g028835 | LOC_Os03g18550 | Os03g0296800 | - | Detail |
| C1H3g30555 | 3:9,213,604-9,215,153 | - | C2H3g30506 | CX3g028050 | LOC_Os03g18560 | Os03g0297000 | - | Detail |
| C1H3g12769 | 3:9,215,084-9,217,108 | + | C2H3g04349 | CX3g025475 | LOC_Os03g18570 | Os03g0297100 | - | Detail |
| C1H3g07511 | 3:9,219,673-9,221,314 | + | C2H3g04349 | CX3g025475 | LOC_Os03g18570 | Os03g0297100 | - | Detail |
| C1H3g00177 | 3:9,223,391-9,226,868 | - | C2H3g03893 | CX3g027573 | LOC_Os03g18590 | Os03g0297400 | - | Detail |
| C1H3g05450 | 3:9,239,825-9,240,508 | - | C2H3g00141 | CX3g025598 | LOC_Os03g18600 | Os03g0297600 | OsPYL6 | Detail |
| C1H3g01318 | 3:9,252,872-9,255,465 | + | C2H3g24611 | CX3g026248 | LOC_Os03g18620 | Os03g0297700 | - | Detail |
| C1H3g30188 | 3:9,256,770-9,259,828 | + | C2H3g04152 | CX3g031004 | LOC_Os03g18630 | Os03g0297800 | - | Detail |
| C1H3g16689 | 3:9,268,237-9,271,260 | + | C2H3g14622 | CX3g028886 | LOC_Os03g18640 | Os03g0297900 | - | Detail |
| C1H3g05714 | 3:9,276,043-9,276,591 | + | C2H3g25925 | CX3g026355 | LOC_Os03g18660 | Os03g0298100 | - | Detail |
| C1H3g07440 | 3:9,280,154-9,282,214 | + | C2H3g07384 | CX3g027215 | LOC_Os03g18680 | Os03g0298300 | - | Detail |
| C1H3g06475 | 3:9,285,370-9,289,128 | + | C2H3g24260 | CX3g025175 | LOC_Os03g18690 | Os03g0298400 | - | Detail |
| C1H3g27200 | 3:9,290,125-9,292,554 | - | C2H3g02615 | CX3g031330 | LOC_Os03g18700 | Os03g0298600 | - | Detail |
| C1H3g23179 | 3:9,293,647-9,300,180 | - | C2H3g28411 | CX3g027965 | LOC_Os03g18710 | Os03g0298700 | - | Detail |
| C1H3g30107 | 3:9,301,774-9,305,839 | - | C2H3g22544 | CX3g028856 | LOC_Os03g18720 | Os03g0298800 | - | Detail |
| C1H3g08723 | 3:9,317,441-9,318,628 | + | C2H3g15045 | CX3g029271 | LOC_Os03g18740 | Os03g0299200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g23023 | 12:16,844,722-16,846,654 | + | C1H12g07006 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C2H12g01778 | 12:16,849,512-16,852,172 | - | C1H12g03851 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C2H12g29019 | 12:16,857,902-16,861,024 | + | C1H12g10988 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C2H12g27722 | 12:16,864,496-16,867,163 | + | C1H12g02725 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C2H12g10634 | 12:16,868,389-16,874,203 | - | C1H12g25225 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C2H12g22973 | 12:16,875,174-16,875,362 | + | C1H6g25666 | - | - | - | - | Detail |
| C2H12g27329 | 12:16,888,298-16,888,769 | + | - | - | - | - | - | Detail |
| C2H12g11130 | 12:16,900,311-16,907,890 | + | C1H12g02230 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C2H12g25999 | 12:16,909,770-16,913,007 | - | C1H12g03710 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C2H12g03027 | 12:16,923,231-16,932,224 | - | C1H12g17769 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C2H12g05645 | 12:16,942,922-16,945,372 | - | C1H12g27986 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C2H12g00633 | 12:16,970,353-16,972,425 | - | C1H12g26954 | CX12g016087 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C2H12g11467 | 12:16,972,650-16,973,531 | - | C1H12g26954 | CX12g016087 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C2H12g07164 | 12:17,001,212-17,002,585 | - | C1H12g26954 | CX12g018119 | LOC_Os12g32920 | Os12g0481000 | - | Detail |
| C2H12g09815 | 12:17,006,303-17,007,725 | - | C1H12g03418 | CX12g015793 | LOC_Os12g32930 | Os12g0513800 | - | Detail |
| C2H12g04487 | 12:17,008,233-17,010,395 | - | C1H12g27576 | CX12g018613 | LOC_Os12g32940 | Os12g0514000 | OsPLT15 | Detail |
| C2H12g14026 | 12:17,014,333-17,017,549 | - | C1H12g02478 | CX12g015332 | LOC_Os12g32950 | Os12g0514100 | - | Detail |
| C2H12g26822 | 12:17,022,203-17,022,805 | - | C1H12g29231 | CX12g016868 | LOC_Os12g32970 | Os12g0514300 | - | Detail |
| C2H12g20474 | 12:17,025,754-17,029,407 | - | C1H12g18347 | CX12g018673 | LOC_Os12g32980 | Os12g0514400 | SAB23 | Detail |
| C2H12g13347 | 12:17,031,309-17,037,504 | - | C1H12g11241 | CX12g017191 | LOC_Os12g32986 | Os12g0514500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |