| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g18943 | 3:9,086,131-9,086,340 | - | C2H3g08331 | CX3g027094 | LOC_Os03g18250 | Os03g0293700 | - | Detail |
| C1H3g20557 | 3:9,086,355-9,086,675 | - | C2H3g19683 | CX3g026319 | LOC_Os03g18250 | Os03g0293700 | - | Detail |
| C1H3g18167 | 3:9,090,421-9,091,664 | - | C2H3g29031 | CX3g027241 | LOC_Os03g18290 | Os03g0294032 | - | Detail |
| C1H3g14801 | 3:9,093,159-9,095,252 | + | C2H3g30268 | CX3g028794 | LOC_Os03g18300 | Os03g0294100 | - | Detail |
| C1H3g25931 | 3:9,096,261-9,109,836 | + | C2H3g05313 | CX3g028900 | LOC_Os03g18310 | Os03g0294200 | OsF2KP2, FLO23 | Detail |
| C1H3g00522 | 3:9,113,220-9,114,136 | + | C2H3g04577 | CX3g027503 | LOC_Os03g18340 | - | - | Detail |
| C1H3g23335 | 3:9,115,718-9,120,094 | - | C2H3g01948 | CX3g028771 | LOC_Os03g18350 | Os03g0294600 | - | Detail |
| C1H3g31328 | 3:9,123,510-9,127,705 | + | C2H3g16769 | CX3g027365 | LOC_Os03g18360 | Os03g0294700 | OsETOL1, OsSTA97 | Detail |
| C1H3g11627 | 3:9,128,964-9,132,379 | - | C2H3g29602 | CX3g025695 | LOC_Os03g18370 | Os03g0294800 | - | Detail |
| C1H3g24108 | 3:9,135,446-9,141,813 | - | C2H3g22783 | CX3g025838 | LOC_Os03g18380 | Os03g0294900 | - | Detail |
| C1H3g20168 | 3:9,142,590-9,147,394 | - | C2H3g30641 | CX3g025257 | LOC_Os03g18410 | Os03g0295400 | - | Detail |
| C1H3g08126 | 3:9,147,522-9,150,994 | + | C2H3g21153 | CX3g028581 | LOC_Os03g18420 | Os03g0295500 | - | Detail |
| C1H3g20275 | 3:9,154,130-9,157,600 | - | C2H3g02295 | CX3g030446 | LOC_Os03g18430 | Os03g0295600 | - | Detail |
| C1H3g31205 | 3:9,164,201-9,176,109 | + | C2H3g07925 | CX3g025269 | LOC_Os03g18440 | Os03g0295700 | - | Detail |
| C1H3g26210 | 3:9,176,357-9,177,781 | - | C2H3g21710 | CX3g031348 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| C1H3g13974 | 3:9,179,072-9,179,332 | - | C2H3g11997 | CX3g027991 | LOC_Os03g18454 | Os03g0295800 | - | Detail |
| C1H3g12024 | 3:9,179,956-9,181,857 | - | C2H3g28045 | CX3g025833 | LOC_Os03g18470 | Os03g0295866 | - | Detail |
| C1H3g21811 | 3:9,183,197-9,185,870 | - | C2H3g22218 | CX3g028946 | LOC_Os03g18480 | Os03g0296000 | OsTDF1 | Detail |
| C1H3g02844 | 3:9,187,814-9,188,849 | + | C2H3g23079 | CX3g028263 | LOC_Os03g18490 | Os03g0296200 | - | Detail |
| C1H3g05929 | 3:9,189,645-9,192,656 | - | C2H3g17809 | CX3g027261 | LOC_Os03g18500 | Os03g0296300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02593 | 4:29,326,920-29,329,525 | - | C1H4g30864 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C2H4g28957 | 4:29,330,937-29,334,919 | + | C1H4g09343 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C2H4g00001 | 4:29,335,587-29,337,864 | - | C1H4g05828 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C2H4g12242 | 4:29,346,217-29,350,384 | + | C1H4g09596 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C2H4g11326 | 4:29,350,962-29,353,825 | + | C1H4g30725 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C2H4g21652 | 4:29,354,782-29,355,237 | - | - | CX4g034903 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| C2H4g19860 | 4:29,362,450-29,363,014 | + | C1H4g22043 | CX4g033683 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g10951 | 4:29,379,023-29,380,236 | - | C1H4g10999 | CX4g036202 | LOC_Os04g35610 | Os04g0118700 | - | Detail |
| C2H4g15180 | 4:29,387,199-29,389,061 | + | C1H4g22979 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g00735 | 4:29,390,985-29,393,367 | + | C1H4g03241 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03747 | 4:29,396,383-29,398,015 | + | C1H4g01851 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03474 | 4:29,400,385-29,401,819 | + | C1H4g29852 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g06767 | 4:29,415,602-29,416,401 | - | C1H4g05569 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C2H4g00020 | 4:29,417,068-29,427,230 | - | C1H4g31368 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C2H4g16878 | 4:29,428,962-29,429,486 | + | - | CX4g036271 | LOC_Os04g43720 | Os04g0517600 | - | Detail |
| C2H4g20070 | 4:29,431,894-29,432,340 | - | - | - | - | - | - | Detail |
| C2H4g09686 | 4:29,431,991-29,432,428 | + | - | - | - | - | - | Detail |
| C2H4g30626 | 4:29,434,012-29,437,838 | - | C1H4g07804 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C2H4g27314 | 4:29,439,637-29,441,953 | + | C1H4g29276 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C2H4g03010 | 4:29,447,466-29,448,038 | - | C1H4g22147 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |