| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30819 | 3:8,770,141-8,774,526 | + | C2H3g05135 | CX3g029393 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| C1H3g23357 | 3:8,776,012-8,778,687 | - | C2H3g11924 | CX3g028814 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| C1H3g16747 | 3:8,787,399-8,790,131 | + | C2H3g28874 | CX3g028365 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| C1H3g27086 | 3:8,791,690-8,791,976 | - | C2H3g08715 | CX3g026690 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| C1H3g29184 | 3:8,795,155-8,797,094 | - | C2H3g22847 | CX3g030677 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| C1H3g05095 | 3:8,804,615-8,805,433 | - | C2H3g20359 | CX3g026247 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| C1H3g02097 | 3:8,819,749-8,825,527 | + | C2H3g27675 | CX3g029968 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| C1H3g16177 | 3:8,830,806-8,835,037 | + | C2H3g09757 | CX3g025194 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| C1H3g12393 | 3:8,837,212-8,839,228 | - | C2H3g14774 | CX3g027864 | LOC_Os03g17860 | Os03g0287900 | - | Detail |
| C1H3g31312 | 3:8,841,681-8,842,370 | + | C2H3g27564 | CX3g028664 | LOC_Os03g17870 | Os03g0288000 | - | Detail |
| C1H3g00118 | 3:8,849,777-8,854,775 | + | C2H3g23362 | CX3g028015 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C1H3g25481 | 3:8,856,043-8,858,066 | + | C2H3g17267 | CX3g026722 | LOC_Os03g17910 | Os03g0288400 | - | Detail |
| C1H3g14781 | 3:8,858,426-8,861,725 | + | C2H3g21876 | CX3g027011 | LOC_Os03g17920 | Os03g0288500 | - | Detail |
| C1H3g27293 | 3:8,864,540-8,867,759 | + | C2H3g27997 | CX3g030831 | LOC_Os03g17930 | Os03g0288600 | - | Detail |
| C1H3g19930 | 3:8,868,689-8,870,597 | - | C2H3g11409 | CX3g027560 | LOC_Os03g17940 | Os03g0288700 | - | Detail |
| C1H3g10814 | 3:8,872,487-8,876,594 | + | C2H3g03519 | CX3g029037 | LOC_Os03g17950 | Os03g0288800 | - | Detail |
| C1H3g03942 | 3:8,876,970-8,879,480 | + | C2H3g04708 | CX3g026332 | LOC_Os03g17960 | Os03g0288900 | - | Detail |
| C1H3g28173 | 3:8,884,078-8,889,386 | + | C2H3g30489 | CX3g025870 | LOC_Os03g17980 | Os03g0289100 | - | Detail |
| C1H3g16506 | 3:8,893,468-8,895,978 | + | C2H3g00076 | CX3g029623 | LOC_Os03g17990 | Os03g0289200 | - | Detail |
| C1H3g21351 | 3:8,899,345-8,902,878 | + | C2H3g12597 | CX3g025090 | LOC_Os03g18010 | Os03g0289300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g29646 | 2:110,149-110,553 | - | C1H2g13220 | CX11g014422 | LOC_Os02g01160 | Os02g0101600 | - | Detail |
| C2H2g11074 | 2:111,543-121,718 | - | C1H2g30963 | CX2g019334 | LOC_Os02g01170 | Os02g0101700 | - | Detail |
| C2H2g10781 | 2:121,974-133,035 | - | C1H2g15406 | CX2g022192 | LOC_Os02g01180 | Os02g0101800 | - | Detail |
| C2H2g02133 | 2:137,837-138,712 | - | C1H2g24397 | CX2g022509 | LOC_Os02g01200 | Os02g0102000 | - | Detail |
| C2H2g24517 | 2:139,693-140,385 | - | C1H2g23055 | - | - | Os02g0102000 | - | Detail |
| C2H2g28066 | 2:144,616-146,489 | + | C1H2g14065 | CX2g020716 | LOC_Os02g01210 | Os02g0102200 | - | Detail |
| C2H2g20560 | 2:148,903-151,225 | + | C1H2g21251 | CX2g021896 | LOC_Os02g01220 | Os02g0102300 | STR5, OsHAC1;1, OsStr5 | Detail |
| C2H2g21540 | 2:151,284-154,276 | - | C1H2g15775 | CX2g019258 | LOC_Os02g01230 | Os02g0102400 | - | Detail |
| C2H2g20632 | 2:155,822-158,099 | + | C1H2g31400 | CX2g019481 | LOC_Os02g01245 | Os02g0102600 | - | Detail |
| C2H2g21359 | 2:160,640-161,262 | - | C1H2g10043 | CX2g023426 | LOC_Os02g01250 | Os02g0102700 | - | Detail |
| C2H2g17791 | 2:163,731-169,098 | + | C1H2g25884 | CX2g023621 | LOC_Os02g01270 | Os02g0102800 | - | Detail |
| C2H2g30002 | 2:171,313-176,361 | + | C1H2g05395 | CX2g020285 | LOC_Os02g01280 | Os02g0102900 | - | Detail |
| C2H2g21048 | 2:176,477-176,944 | - | C1H2g05563 | CX2g019812 | LOC_Os02g01290 | Os02g0103000 | - | Detail |
| C2H2g08778 | 2:178,262-178,813 | - | C1H2g05222 | CX2g022055 | LOC_Os02g01300 | Os02g0103200 | OsPMEI5 | Detail |
| C2H2g27196 | 2:180,195-180,797 | - | C1H2g08174 | CX2g021440 | LOC_Os02g01310 | Os02g0103300 | OsPMEI6 | Detail |
| C2H2g16016 | 2:187,255-188,841 | - | C1H2g30479 | CX2g021507 | LOC_Os02g01326 | Os02g0103500 | - | Detail |
| C2H2g03235 | 2:191,053-194,086 | - | C1H2g05195 | CX2g021507 | LOC_Os02g01326 | Os02g0103600 | Os5NG4 | Detail |
| C2H2g08514 | 2:195,526-196,939 | - | C1H2g27127 | CX2g019603 | LOC_Os02g01332 | Os02g0103700 | - | Detail |
| C2H2g13645 | 2:197,233-198,838 | - | C1H2g03431 | CX2g020827 | LOC_Os02g01340 | Os02g0103800 | - | Detail |
| C2H2g30264 | 2:201,155-205,701 | - | C1H2g11222 | CX2g018866 | LOC_Os02g01350 | Os02g0103900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |