| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30819 | 3:8,770,141-8,774,526 | + | C2H3g05135 | CX3g029393 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| C1H3g23357 | 3:8,776,012-8,778,687 | - | C2H3g11924 | CX3g028814 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| C1H3g16747 | 3:8,787,399-8,790,131 | + | C2H3g28874 | CX3g028365 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| C1H3g27086 | 3:8,791,690-8,791,976 | - | C2H3g08715 | CX3g026690 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| C1H3g29184 | 3:8,795,155-8,797,094 | - | C2H3g22847 | CX3g030677 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| C1H3g05095 | 3:8,804,615-8,805,433 | - | C2H3g20359 | CX3g026247 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| C1H3g02097 | 3:8,819,749-8,825,527 | + | C2H3g27675 | CX3g029968 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| C1H3g16177 | 3:8,830,806-8,835,037 | + | C2H3g09757 | CX3g025194 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| C1H3g12393 | 3:8,837,212-8,839,228 | - | C2H3g14774 | CX3g027864 | LOC_Os03g17860 | Os03g0287900 | - | Detail |
| C1H3g31312 | 3:8,841,681-8,842,370 | + | C2H3g27564 | CX3g028664 | LOC_Os03g17870 | Os03g0288000 | - | Detail |
| C1H3g00118 | 3:8,849,777-8,854,775 | + | C2H3g23362 | CX3g028015 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C1H3g25481 | 3:8,856,043-8,858,066 | + | C2H3g17267 | CX3g026722 | LOC_Os03g17910 | Os03g0288400 | - | Detail |
| C1H3g14781 | 3:8,858,426-8,861,725 | + | C2H3g21876 | CX3g027011 | LOC_Os03g17920 | Os03g0288500 | - | Detail |
| C1H3g27293 | 3:8,864,540-8,867,759 | + | C2H3g27997 | CX3g030831 | LOC_Os03g17930 | Os03g0288600 | - | Detail |
| C1H3g19930 | 3:8,868,689-8,870,597 | - | C2H3g11409 | CX3g027560 | LOC_Os03g17940 | Os03g0288700 | - | Detail |
| C1H3g10814 | 3:8,872,487-8,876,594 | + | C2H3g03519 | CX3g029037 | LOC_Os03g17950 | Os03g0288800 | - | Detail |
| C1H3g03942 | 3:8,876,970-8,879,480 | + | C2H3g04708 | CX3g026332 | LOC_Os03g17960 | Os03g0288900 | - | Detail |
| C1H3g28173 | 3:8,884,078-8,889,386 | + | C2H3g30489 | CX3g025870 | LOC_Os03g17980 | Os03g0289100 | - | Detail |
| C1H3g16506 | 3:8,893,468-8,895,978 | + | C2H3g00076 | CX3g029623 | LOC_Os03g17990 | Os03g0289200 | - | Detail |
| C1H3g21351 | 3:8,899,345-8,902,878 | + | C2H3g12597 | CX3g025090 | LOC_Os03g18010 | Os03g0289300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g06818 | 1:28,526,393-28,526,861 | + | C1H1g21149 | CX1g003072 | LOC_Os01g55510 | Os01g0760000 | - | Detail |
| C2H1g24110 | 1:28,529,762-28,531,888 | + | C1H1g04922 | CX1g005270 | LOC_Os01g55520 | Os01g0760300 | OsRopGEF8 | Detail |
| C2H1g28840 | 1:28,534,612-28,537,620 | - | C1H1g22131 | CX1g005505 | LOC_Os01g55530 | Os01g0760400 | - | Detail |
| C2H1g30012 | 1:28,541,096-28,546,131 | - | C1H1g24669 | CX1g003690 | LOC_Os01g55540 | Os01g0760600 | - | Detail |
| C2H1g07156 | 1:28,547,738-28,551,133 | - | C1H1g26811 | CX1g007126 | LOC_Os01g55549 | Os01g0760800 | OsGL2 | Detail |
| C2H1g22947 | 1:28,552,475-28,554,824 | - | C1H1g11405 | CX1g001192 | LOC_Os01g55560 | Os01g0760900 | - | Detail |
| C2H1g14280 | 1:28,554,877-28,557,714 | + | C1H1g01758 | CX1g003567 | LOC_Os01g55570 | Os01g0761000 | - | Detail |
| C2H1g02714 | 1:28,557,818-28,564,147 | - | C1H1g03450 | CX1g001741 | LOC_Os01g55580 | Os01g0761100 | - | Detail |
| C2H1g29776 | 1:28,571,953-28,578,652 | + | C1H1g17949 | CX1g001107 | LOC_Os01g55590 | Os01g0761300 | - | Detail |
| C2H1g30373 | 1:28,578,839-28,581,019 | - | C1H1g13293 | CX1g004639 | LOC_Os01g55600 | Os01g0761400 | - | Detail |
| C2H1g11332 | 1:28,584,407-28,586,426 | - | C1H1g18764 | CX1g005836 | LOC_Os01g55610 | Os01g0761500 | - | Detail |
| C2H1g16819 | 1:28,595,673-28,597,442 | + | C1H1g08828 | CX1g006499 | LOC_Os01g55690 | Os01g0762500 | GluA-1 | Detail |
| C2H1g22476 | 1:28,601,449-28,602,425 | + | C1H1g25958 | CX1g002406 | LOC_Os01g55640 | Os01g0761900 | - | Detail |
| C2H1g16751 | 1:28,602,563-28,607,133 | - | C1H1g07257 | CX1g004093 | LOC_Os01g55650 | Os01g0762000 | - | Detail |
| C2H1g07048 | 1:28,608,858-28,609,964 | - | C1H1g22782 | - | LOC_Os01g55670 | Os01g0762300 | - | Detail |
| C2H1g10676 | 1:28,610,622-28,612,633 | - | C1H1g21751 | - | LOC_Os01g55700 | Os01g0762400 | - | Detail |
| C2H1g14975 | 1:28,614,432-28,616,206 | + | C1H1g08828 | CX1g005220 | LOC_Os01g55690 | Os01g0762500 | GluA-1 | Detail |
| C2H1g07008 | 1:28,617,059-28,620,014 | - | C1H1g15736 | CX1g000972 | LOC_Os01g55700 | Os01g0762400 | - | Detail |
| C2H1g29169 | 1:28,625,528-28,628,623 | - | C1H1g29162 | CX1g006292 | LOC_Os01g55730 | Os01g0763000 | - | Detail |
| C2H1g11671 | 1:28,628,942-28,633,361 | + | C1H1g04887 | CX1g000567 | LOC_Os01g55740 | Os01g0763100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |