| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30819 | 3:8,770,141-8,774,526 | + | C2H3g05135 | CX3g029393 | LOC_Os03g17740 | Os03g0286300 | - | Detail |
| C1H3g23357 | 3:8,776,012-8,778,687 | - | C2H3g11924 | CX3g028814 | LOC_Os03g17760 | Os03g0286500 | - | Detail |
| C1H3g16747 | 3:8,787,399-8,790,131 | + | C2H3g28874 | CX3g028365 | LOC_Os03g17780 | Os03g0286800 | - | Detail |
| C1H3g27086 | 3:8,791,690-8,791,976 | - | C2H3g08715 | CX3g026690 | LOC_Os03g17790 | Os03g0286900 | OsRCI2-5 | Detail |
| C1H3g29184 | 3:8,795,155-8,797,094 | - | C2H3g22847 | CX3g030677 | LOC_Os03g17800 | Os03g0287100 | OsPITPα, OsPITPalpha | Detail |
| C1H3g05095 | 3:8,804,615-8,805,433 | - | C2H3g20359 | CX3g026247 | LOC_Os03g17810 | Os03g0287400 | - | Detail |
| C1H3g02097 | 3:8,819,749-8,825,527 | + | C2H3g27675 | CX3g029968 | LOC_Os03g17840 | Os03g0287700 | - | Detail |
| C1H3g16177 | 3:8,830,806-8,835,037 | + | C2H3g09757 | CX3g025194 | LOC_Os03g17850 | Os03g0287800 | OsGT43B | Detail |
| C1H3g12393 | 3:8,837,212-8,839,228 | - | C2H3g14774 | CX3g027864 | LOC_Os03g17860 | Os03g0287900 | - | Detail |
| C1H3g31312 | 3:8,841,681-8,842,370 | + | C2H3g27564 | CX3g028664 | LOC_Os03g17870 | Os03g0288000 | - | Detail |
| C1H3g00118 | 3:8,849,777-8,854,775 | + | C2H3g23362 | CX3g028015 | LOC_Os03g17900 | Os03g0288300 | - | Detail |
| C1H3g25481 | 3:8,856,043-8,858,066 | + | C2H3g17267 | CX3g026722 | LOC_Os03g17910 | Os03g0288400 | - | Detail |
| C1H3g14781 | 3:8,858,426-8,861,725 | + | C2H3g21876 | CX3g027011 | LOC_Os03g17920 | Os03g0288500 | - | Detail |
| C1H3g27293 | 3:8,864,540-8,867,759 | + | C2H3g27997 | CX3g030831 | LOC_Os03g17930 | Os03g0288600 | - | Detail |
| C1H3g19930 | 3:8,868,689-8,870,597 | - | C2H3g11409 | CX3g027560 | LOC_Os03g17940 | Os03g0288700 | - | Detail |
| C1H3g10814 | 3:8,872,487-8,876,594 | + | C2H3g03519 | CX3g029037 | LOC_Os03g17950 | Os03g0288800 | - | Detail |
| C1H3g03942 | 3:8,876,970-8,879,480 | + | C2H3g04708 | CX3g026332 | LOC_Os03g17960 | Os03g0288900 | - | Detail |
| C1H3g28173 | 3:8,884,078-8,889,386 | + | C2H3g30489 | CX3g025870 | LOC_Os03g17980 | Os03g0289100 | - | Detail |
| C1H3g16506 | 3:8,893,468-8,895,978 | + | C2H3g00076 | CX3g029623 | LOC_Os03g17990 | Os03g0289200 | - | Detail |
| C1H3g21351 | 3:8,899,345-8,902,878 | + | C2H3g12597 | CX3g025090 | LOC_Os03g18010 | Os03g0289300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g15711 | 7:16,781,653-16,783,129 | + | C1H7g11266 | CX7g046410 | LOC_Os07g34670 | Os07g0104233 | - | Detail |
| C2H7g20682 | 7:16,802,323-16,804,315 | + | C1H7g06346 | CX7g048474 | LOC_Os07g34710 | Os07g0531400 | - | Detail |
| C2H7g01519 | 7:16,807,793-16,812,204 | - | C1H7g26670 | CX7g049203 | LOC_Os07g34730 | Os07g0531600 | - | Detail |
| C2H7g29843 | 7:16,812,389-16,817,570 | + | C1H7g02948 | CX7g046216 | LOC_Os07g34740 | Os07g0531700 | - | Detail |
| C2H7g23979 | 7:16,841,013-16,844,156 | - | C1H7g03021 | CX7g047835 | LOC_Os07g34750 | Os07g0531900 | - | Detail |
| C2H7g05223 | 7:16,853,840-16,854,834 | - | - | CX7g046730 | - | - | - | Detail |
| C2H7g09860 | 7:16,853,921-16,854,346 | + | - | - | - | - | - | Detail |
| C2H7g08903 | 7:16,881,400-16,882,178 | - | C1H7g23956 | CX7g047835 | LOC_Os07g34750 | Os07g0531900 | - | Detail |
| C2H7g00795 | 7:16,883,447-16,883,777 | - | C1H7g23956 | CX7g047835 | LOC_Os07g34750 | Os07g0531900 | - | Detail |
| C2H7g17878 | 7:16,883,829-16,884,944 | - | C1H7g23956 | CX7g048738 | LOC_Os07g34750 | Os07g0531900 | - | Detail |
| C2H7g12845 | 7:16,898,331-16,899,101 | + | C1H7g05981 | CX7g049842 | LOC_Os07g34780 | Os07g0532500 | - | Detail |
| C2H7g20790 | 7:16,918,832-16,921,363 | + | C1H7g07826 | CX7g049842 | LOC_Os07g34830 | Os07g0532500 | - | Detail |
| C2H7g18238 | 7:16,922,902-16,924,862 | + | C1H7g20876 | CX7g049014 | LOC_Os07g34840 | Os07g0285900 | - | Detail |
| C2H7g05744 | 7:16,934,579-16,936,919 | - | C1H7g07826 | CX7g049842 | LOC_Os07g34830 | Os07g0532500 | - | Detail |
| C2H7g28948 | 7:16,984,416-16,988,304 | + | - | - | - | Os07g0533850 | - | Detail |
| C2H7g21232 | 7:16,994,042-16,998,011 | + | C1H7g29204 | CX7g048448 | - | - | - | Detail |
| C2H7g20273 | 7:17,000,096-17,003,416 | + | C1H7g23685 | CX7g046369 | LOC_Os07g35770 | Os07g0534100 | - | Detail |
| C2H7g16895 | 7:17,004,120-17,007,397 | + | C1H7g05603 | CX7g046369 | LOC_Os07g34980 | Os07g0534300 | - | Detail |
| C2H7g19630 | 7:17,012,614-17,015,798 | + | C1H7g05603 | CX7g048221 | LOC_Os07g34980 | Os07g0534500 | OsRLCK233 | Detail |
| C2H7g00366 | 7:17,024,900-17,030,747 | + | C1H7g26013 | CX7g045988 | LOC_Os07g35004 | Os07g0534700 | Gnk2RLK-4 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |