| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01633 | 1:13,985,566-13,987,145 | + | C2H1g16372 | CX1g000761 | LOC_Os01g27380 | Os01g0371400 | - | Detail |
| C1H1g01995 | 1:13,987,557-13,990,326 | + | C2H1g14709 | CX1g000761 | LOC_Os01g27390 | Os01g0371500 | - | Detail |
| C1H1g01504 | 1:13,998,693-13,999,781 | + | C2H1g17472 | CX1g005217 | LOC_Os01g27470 | Os01g0918300 | - | Detail |
| C1H1g17266 | 1:14,001,289-14,001,888 | + | - | - | - | - | - | Detail |
| C1H1g12705 | 1:14,004,630-14,005,499 | + | C2H1g29817 | CX1g000438 | LOC_Os01g27480 | Os01g0372400 | - | Detail |
| C1H1g03999 | 1:14,014,209-14,018,105 | - | C2H1g22981 | CX1g002992 | LOC_Os01g27520 | Os01g0372700 | - | Detail |
| C1H1g23536 | 1:14,024,746-14,026,920 | - | C2H1g25759 | - | LOC_Os01g27570 | Os01g0373200 | - | Detail |
| C1H1g26843 | 1:14,052,677-14,053,791 | + | C2H1g20925 | CX1g000761 | LOC_Os01g27630 | Os01g0374000 | - | Detail |
| C1H1g29878 | 1:14,074,603-14,075,089 | - | - | CX1g006362 | - | - | - | Detail |
| C1H1g28149 | 1:14,095,777-14,101,195 | + | C2H1g20909 | CX1g004412 | LOC_Os01g27700 | Os01g0374600 | - | Detail |
| C1H1g20959 | 1:14,114,711-14,118,317 | + | C2H1g09188 | CX1g004732 | LOC_Os01g27720 | Os01g0374900 | - | Detail |
| C1H1g00644 | 1:14,125,958-14,129,334 | - | C2H1g06879 | CX1g001904 | LOC_Os01g27730 | Os01g0375000 | - | Detail |
| C1H1g07698 | 1:14,135,205-14,139,334 | - | - | - | - | - | - | Detail |
| C1H1g01071 | 1:14,140,780-14,153,926 | + | C2H1g10267 | CX1g003513 | LOC_Os01g27750 | Os01g0375200 | - | Detail |
| C1H1g18637 | 1:14,162,937-14,172,346 | + | C2H1g13628 | CX1g003513 | LOC_Os01g27750 | Os01g0375500 | - | Detail |
| C1H1g22380 | 1:14,195,576-14,195,833 | + | - | - | - | - | - | Detail |
| C1H1g01263 | 1:14,225,763-14,230,411 | - | C2H1g12554 | CX1g004909 | LOC_Os01g27880 | Os01g0376700 | - | Detail |
| C1H1g16294 | 1:14,233,831-14,235,701 | - | C2H1g07279 | CX1g001309 | LOC_Os01g27890 | Os01g0377000 | - | Detail |
| C1H1g11469 | 1:14,242,780-14,248,505 | - | C2H1g24403 | CX1g006147 | LOC_Os01g27940 | Os01g0377500 | - | Detail |
| C1H1g30770 | 1:14,260,828-14,265,036 | + | C2H1g07748 | CX1g002553 | LOC_Os01g27990 | Os01g0377700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g13421 | 2:30,379,410-30,380,372 | - | - | CX2g024909 | LOC_Os02g54450 | Os02g0785700 | - | Detail |
| C2H2g10345 | 2:30,381,783-30,382,312 | + | - | - | LOC_Os05g25680 | Os05g0321600 | - | Detail |
| C2H2g09400 | 2:30,384,038-30,384,562 | + | C1H2g22630 | CX2g022096 | LOC_Os02g54470 | Os02g0785800 | - | Detail |
| C2H2g24301 | 2:30,386,825-30,395,048 | + | C1H2g16607 | CX2g021693 | LOC_Os02g54490 | Os02g0785900 | - | Detail |
| C2H2g16599 | 2:30,396,428-30,404,789 | + | C1H2g04640 | CX2g024703 | LOC_Os02g54500 | Os02g0786000 | - | Detail |
| C2H2g21668 | 2:30,410,106-30,416,388 | + | C1H2g14270 | CX2g019009 | LOC_Os02g54510 | Os02g0786200 | - | Detail |
| C2H2g02803 | 2:30,424,686-30,428,199 | + | C1H2g29436 | CX2g024716 | LOC_Os02g54520 | Os02g0786400 | OsMYB36b | Detail |
| C2H2g17562 | 2:30,429,198-30,429,737 | + | C1H2g24406 | CX2g020901 | LOC_Os02g54530 | Os02g0786500 | - | Detail |
| C2H2g10089 | 2:30,433,843-30,434,364 | + | C1H2g01457 | CX2g020901 | LOC_Os02g54540 | Os02g0786500 | - | Detail |
| C2H2g17982 | 2:30,440,204-30,440,821 | + | C1H2g01457 | CX2g020771 | LOC_Os02g54560 | Os02g0786900 | - | Detail |
| C2H2g09660 | 2:30,441,711-30,442,247 | - | C1H2g13395 | CX2g023717 | LOC_Os02g54570 | Os02g0787000 | - | Detail |
| C2H2g14363 | 2:30,443,501-30,446,969 | + | C1H2g05721 | CX2g022090 | LOC_Os02g54580 | Os02g0787100 | - | Detail |
| C2H2g24176 | 2:30,447,856-30,448,053 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g27576 | 2:30,448,155-30,450,195 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g16691 | 2:30,450,311-30,451,725 | + | C1H2g17039 | CX2g022088 | LOC_Os02g54590 | Os02g0787200 | - | Detail |
| C2H2g16242 | 2:30,455,425-30,456,528 | - | C1H2g05581 | CX2g019876 | LOC_Os02g54600 | Os02g0787300 | SMG1, OsMKK4, MKK4, OsMKK4/SMG1 | Detail |
| C2H2g29050 | 2:30,480,799-30,485,502 | + | C1H2g05584 | CX2g023310 | LOC_Os02g54624 | Os02g0787500 | - | Detail |
| C2H2g29172 | 2:30,490,033-30,490,416 | + | C1H2g08821 | CX2g020275 | - | - | - | Detail |
| C2H2g09069 | 2:30,495,779-30,501,939 | + | C1H2g10849 | CX2g019134 | LOC_Os02g54640 | Os02g0787600 | - | Detail |
| C2H2g02130 | 2:30,503,464-30,510,511 | - | C1H2g10467 | CX2g020090 | LOC_Os02g54650 | Os02g0787800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |