| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g29978 | 3:8,632,140-8,633,936 | - | C2H3g26100 | CX3g030457 | LOC_Os03g17510 | Os03g0283500 | - | Detail |
| C1H3g13527 | 3:8,634,212-8,638,837 | - | C2H3g10500 | CX3g030456 | LOC_Os03g17520 | Os03g0283600 | - | Detail |
| C1H3g19722 | 3:8,642,267-8,649,715 | + | C2H3g23371 | CX3g026672 | LOC_Os03g17540 | Os03g0283800 | - | Detail |
| C1H3g11797 | 3:8,650,695-8,654,069 | - | C2H3g29700 | CX3g029803 | LOC_Os03g17550 | Os03g0283900 | - | Detail |
| C1H3g07283 | 3:8,655,140-8,657,437 | + | C2H3g23379 | CX3g025210 | LOC_Os03g17560 | Os03g0284000 | - | Detail |
| C1H3g27931 | 3:8,658,046-8,667,318 | - | C2H3g10813 | CX3g025348 | LOC_Os03g17570 | Os03g0284100 | OsPRR73, OsCCT11 | Detail |
| C1H3g12560 | 3:8,691,223-8,691,891 | - | C2H3g28337 | CX3g026952 | LOC_Os03g17580 | Os03g0284400 | - | Detail |
| C1H3g02152 | 3:8,693,500-8,697,080 | - | C2H3g30073 | CX3g030728 | LOC_Os03g17590 | Os03g0284500 | - | Detail |
| C1H3g05023 | 3:8,697,860-8,700,838 | + | C2H3g08600 | CX3g026963 | LOC_Os03g17600 | Os03g0284600 | - | Detail |
| C1H3g02865 | 3:8,702,941-8,704,394 | - | C2H1g28459 | - | - | - | - | Detail |
| C1H3g06994 | 3:8,704,987-8,706,392 | + | C2H3g03614 | CX3g025121 | LOC_Os03g16950 | Os03g0284700 | - | Detail |
| C1H3g21431 | 3:8,707,621-8,708,946 | + | C2H3g12259 | CX3g025050 | LOC_Os03g17610 | Os03g0284800 | TOP6A3 | Detail |
| C1H3g26561 | 3:8,709,579-8,719,636 | - | C2H3g11357 | CX3g026635 | LOC_Os03g17634 | Os03g0284900 | - | Detail |
| C1H3g30930 | 3:8,720,347-8,722,674 | + | C2H3g28206 | CX3g031354 | LOC_Os03g17660 | Os03g0285100 | - | Detail |
| C1H3g11566 | 3:8,725,157-8,725,384 | + | C2H3g03876 | CX3g026969 | LOC_Os03g17670 | Os03g0285200 | - | Detail |
| C1H3g09547 | 3:8,729,761-8,729,964 | + | C2H3g05962 | - | LOC_Os03g17680 | Os03g0285300 | - | Detail |
| C1H3g07669 | 3:8,744,754-8,748,068 | + | C2H3g06105 | CX3g026553 | LOC_Os03g17690 | Os03g0285700 | OsAPXa, OsAPX1 | Detail |
| C1H3g30823 | 3:8,749,482-8,752,203 | - | C2H3g17399 | CX3g029338 | LOC_Os03g17700 | Os03g0285800 | - | Detail |
| C1H3g12993 | 3:8,754,885-8,758,010 | - | C2H3g05165 | CX3g029635 | LOC_Os03g17710 | Os03g0285900 | OsRS2Z38 | Detail |
| C1H3g05382 | 3:8,761,562-8,766,518 | + | C2H3g24206 | CX3g025186 | LOC_Os03g17730 | Os03g0286200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g24769 | 1:6,366,071-6,369,837 | - | C1H1g19893 | CX1g004836 | LOC_Os01g12830 | Os01g0228600 | - | Detail |
| C2H1g00699 | 1:6,371,690-6,375,810 | - | C1H1g14653 | CX1g001640 | LOC_Os01g12840 | Os01g0228800 | - | Detail |
| C2H1g15617 | 1:6,384,169-6,392,026 | + | C1H1g26396 | CX1g006490 | LOC_Os01g12860 | Os01g0229000 | - | Detail |
| C2H1g03922 | 1:6,393,549-6,397,022 | - | C1H1g13199 | CX1g006720 | LOC_Os01g12870 | Os01g0229100 | - | Detail |
| C2H1g15811 | 1:6,397,263-6,397,838 | - | C1H1g07711 | - | - | - | - | Detail |
| C2H1g14330 | 1:6,397,298-6,405,488 | + | C1H1g15790 | CX1g003875 | LOC_Os01g12880 | Os01g0229200 | - | Detail |
| C2H1g05009 | 1:6,428,038-6,433,276 | + | C1H1g29443 | CX1g001622 | LOC_Os01g12890 | Os01g0229300 | CCP1, OsEMF1, DFO1, EMF1 | Detail |
| C2H1g10198 | 1:6,434,113-6,436,458 | - | C1H1g08244 | CX1g003284 | LOC_Os01g12900 | Os01g0229400 | RAC1, OsRAC1, OsRac1, Os Rac1 | Detail |
| C2H1g13210 | 1:6,442,722-6,444,692 | + | C1H1g30145 | CX1g003413 | LOC_Os01g12910 | Os01g0229500 | - | Detail |
| C2H1g03678 | 1:6,445,204-6,446,334 | + | C1H1g25208 | CX1g004766 | LOC_Os01g12920 | Os01g0229600 | - | Detail |
| C2H1g05903 | 1:6,447,103-6,453,778 | - | C1H1g01831 | CX1g005969 | LOC_Os01g12930 | Os01g0229700 | - | Detail |
| C2H1g00149 | 1:6,457,701-6,459,828 | - | C1H1g16126 | CX1g000942 | LOC_Os01g12940 | Os01g0229800 | - | Detail |
| C2H1g27747 | 1:6,473,366-6,481,075 | - | C1H1g06612 | CX1g003754 | LOC_Os01g13000 | Os01g0230200 | OsbHLH074 | Detail |
| C2H1g20912 | 1:6,512,790-6,516,964 | + | C1H1g30420 | CX1g006768 | LOC_Os01g13030 | Os01g0231000 | - | Detail |
| C2H1g03048 | 1:6,528,786-6,534,700 | + | C1H1g30529 | CX1g002350 | LOC_Os01g13060 | Os01g0231500 | - | Detail |
| C2H1g22889 | 1:6,539,651-6,541,263 | + | C1H1g25386 | CX1g004775 | LOC_Os01g13070 | Os01g0231600 | - | Detail |
| C2H1g30242 | 1:6,542,597-6,543,746 | - | C1H1g25919 | CX1g000758 | LOC_Os01g13080 | Os01g0231700 | OsP3B | Detail |
| C2H1g00380 | 1:6,544,772-6,548,593 | + | C1H1g30419 | CX1g004219 | LOC_Os01g13090 | Os01g0231800 | - | Detail |
| C2H1g07330 | 1:6,550,709-6,556,293 | + | C1H1g05372 | CX1g004219 | LOC_Os01g13100 | Os01g0231900 | - | Detail |
| C2H1g24942 | 1:6,559,697-6,560,533 | + | C1H1g03374 | CX1g004133 | LOC_Os01g13120 | Os01g0232000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |