| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02805 | 3:8,495,411-8,498,787 | + | C2H3g19709 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C1H3g19384 | 3:8,501,589-8,503,927 | + | C2H3g01163 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C1H3g05247 | 3:8,508,143-8,509,087 | - | C2H3g30239 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C1H3g09869 | 3:8,510,401-8,517,214 | - | C2H3g10844 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C1H3g20489 | 3:8,518,066-8,520,873 | - | C2H3g22572 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C1H3g05953 | 3:8,528,301-8,530,820 | + | C2H3g23238 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C1H3g23808 | 3:8,531,055-8,537,416 | - | C2H3g13223 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C1H3g08368 | 3:8,542,023-8,546,702 | - | C2H3g28841 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C1H3g04312 | 3:8,549,633-8,551,996 | + | C2H3g02883 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g07058 | 3:8,557,281-8,559,581 | + | C2H3g04384 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g16432 | 3:8,567,232-8,573,375 | - | - | CX3g026382 | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| C1H3g15208 | 3:8,591,799-8,593,016 | + | C2H3g12675 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C1H3g13015 | 3:8,593,398-8,595,902 | - | C2H3g17220 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C1H3g25350 | 3:8,596,431-8,600,838 | + | C2H3g11550 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C1H3g12499 | 3:8,600,406-8,605,326 | - | C2H3g03924 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C1H3g23272 | 3:8,607,231-8,611,124 | - | C2H5g03493 | CX3g030233 | LOC_Os07g15980 | Os05g0193800 | - | Detail |
| C1H3g00300 | 3:8,616,097-8,616,946 | - | - | - | - | - | - | Detail |
| C1H3g26286 | 3:8,619,041-8,621,151 | - | C2H3g13775 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| C1H3g04825 | 3:8,622,727-8,625,392 | + | C2H3g16412 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C1H3g31389 | 3:8,626,250-8,628,390 | - | C2H3g25427 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g24619 | 12:17,928,699-17,933,845 | + | C1H12g11343 | CX12g015274 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g25374 | 12:17,935,341-17,936,947 | + | C1H12g12527 | CX12g015274 | LOC_Os12g35060 | - | - | Detail |
| C2H12g07734 | 12:17,940,139-17,945,460 | + | C1H12g11343 | CX12g015274 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g29827 | 12:17,962,037-17,967,917 | + | C1H12g11343 | CX12g015274 | LOC_Os12g44230 | Os12g0639600 | - | Detail |
| C2H12g20928 | 12:17,969,602-17,970,310 | - | C1H12g18294 | CX12g016304 | LOC_Os12g35070 | Os12g0536300 | - | Detail |
| C2H12g00043 | 12:17,974,041-17,974,341 | - | - | - | - | - | - | Detail |
| C2H12g01442 | 12:17,978,373-17,980,105 | - | C1H12g20216 | CX12g018295 | LOC_Os12g35270 | Os12g0538100 | - | Detail |
| C2H12g28133 | 12:17,980,478-17,981,143 | + | - | - | LOC_Os12g35280 | - | - | Detail |
| C2H12g08195 | 12:18,009,283-18,014,687 | + | C1H12g14258 | CX12g016180 | LOC_Os12g35290 | Os12g0538300 | - | Detail |
| C2H12g18808 | 12:18,027,103-18,030,611 | + | C1H12g01248 | CX12g016218 | LOC_Os12g35320 | Os12g0538500 | OsSDEL1, SDEL1 | Detail |
| C2H12g22588 | 12:18,039,756-18,040,067 | + | C1H12g09399 | CX12g016937 | LOC_Os12g35330 | Os12g0538600 | - | Detail |
| C2H12g06405 | 12:18,047,525-18,051,371 | - | C1H12g25862 | - | - | - | - | Detail |
| C2H12g24646 | 12:18,053,088-18,053,402 | + | C1H12g08152 | CX12g018516 | LOC_Os12g35340 | Os12g0538700 | - | Detail |
| C2H12g06117 | 12:18,054,576-18,055,855 | - | C1H12g10069 | - | - | - | - | Detail |
| C2H12g08485 | 12:18,061,971-18,063,038 | + | - | - | - | - | - | Detail |
| C2H12g13849 | 12:18,065,745-18,071,563 | + | C1H12g11332 | CX12g015103 | LOC_Os12g35350 | Os12g0538800 | - | Detail |
| C2H12g24582 | 12:18,071,724-18,078,683 | - | C1H12g06541 | CX12g015271 | LOC_Os12g35360 | Os12g0538900 | - | Detail |
| C2H12g05766 | 12:18,083,130-18,083,837 | + | C1H12g19258 | - | LOC_Os12g35480 | Os12g0540000 | - | Detail |
| C2H12g05658 | 12:18,089,272-18,090,039 | + | C1H12g07194 | CX12g017572 | LOC_Os12g35480 | Os12g0540000 | - | Detail |
| C2H12g10874 | 12:18,093,000-18,094,831 | - | C1H12g21432 | CX12g018350 | LOC_Os01g53760 | Os12g0133800 | OsPIN1d | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |