| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02805 | 3:8,495,411-8,498,787 | + | C2H3g19709 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C1H3g19384 | 3:8,501,589-8,503,927 | + | C2H3g01163 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C1H3g05247 | 3:8,508,143-8,509,087 | - | C2H3g30239 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C1H3g09869 | 3:8,510,401-8,517,214 | - | C2H3g10844 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C1H3g20489 | 3:8,518,066-8,520,873 | - | C2H3g22572 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C1H3g05953 | 3:8,528,301-8,530,820 | + | C2H3g23238 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C1H3g23808 | 3:8,531,055-8,537,416 | - | C2H3g13223 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C1H3g08368 | 3:8,542,023-8,546,702 | - | C2H3g28841 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C1H3g04312 | 3:8,549,633-8,551,996 | + | C2H3g02883 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g07058 | 3:8,557,281-8,559,581 | + | C2H3g04384 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g16432 | 3:8,567,232-8,573,375 | - | - | CX3g026382 | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| C1H3g15208 | 3:8,591,799-8,593,016 | + | C2H3g12675 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C1H3g13015 | 3:8,593,398-8,595,902 | - | C2H3g17220 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C1H3g25350 | 3:8,596,431-8,600,838 | + | C2H3g11550 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C1H3g12499 | 3:8,600,406-8,605,326 | - | C2H3g03924 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C1H3g23272 | 3:8,607,231-8,611,124 | - | C2H5g03493 | CX3g030233 | LOC_Os07g15980 | Os05g0193800 | - | Detail |
| C1H3g00300 | 3:8,616,097-8,616,946 | - | - | - | - | - | - | Detail |
| C1H3g26286 | 3:8,619,041-8,621,151 | - | C2H3g13775 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| C1H3g04825 | 3:8,622,727-8,625,392 | + | C2H3g16412 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C1H3g31389 | 3:8,626,250-8,628,390 | - | C2H3g25427 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g21126 | 7:23,771,715-23,772,615 | + | C1H7g04040 | CX7g048468 | LOC_Os07g48030 | Os07g0677300 | - | Detail |
| C2H7g09992 | 7:23,778,041-23,779,603 | + | C1H7g28878 | CX7g048468 | LOC_Os07g48040 | Os07g0677400 | - | Detail |
| C2H7g26995 | 7:23,782,624-23,784,281 | + | C1H7g15804 | CX7g048468 | LOC_Os07g48050 | Os07g0677500 | - | Detail |
| C2H7g25532 | 7:23,785,214-23,786,929 | - | C1H7g15656 | CX7g048468 | LOC_Os07g48060 | Os07g0677600 | - | Detail |
| C2H7g06145 | 7:23,798,893-23,800,678 | + | C1H7g00915 | CX7g049560 | LOC_Os07g48080 | Os07g0677900 | - | Detail |
| C2H7g29958 | 7:23,811,206-23,811,546 | - | - | - | - | - | - | Detail |
| C2H7g05790 | 7:23,837,822-23,842,165 | - | C1H7g07291 | CX7g049455 | LOC_Os07g48130 | Os07g0679000 | OsHAK9, GDSS | Detail |
| C2H7g02988 | 7:23,863,827-23,868,595 | + | C1H7g06802 | CX7g047676 | LOC_Os07g48160 | Os07g0679300 | - | Detail |
| C2H7g21580 | 7:23,869,382-23,875,301 | - | C1H7g22766 | CX7g050247 | LOC_Os07g48170 | Os07g0679400 | - | Detail |
| C2H7g18269 | 7:23,878,681-23,882,818 | - | C1H7g03838 | CX7g048073 | LOC_Os07g48180 | Os07g0679500 | - | Detail |
| C2H7g04187 | 7:23,883,815-23,890,497 | - | C1H7g09104 | CX7g049651 | LOC_Os07g48200 | Os07g0679700 | - | Detail |
| C2H7g24344 | 7:23,902,621-23,907,704 | - | C1H7g19401 | CX7g046000 | LOC_Os07g48229 | Os07g0680000 | OsVSR5 | Detail |
| C2H7g23531 | 7:23,908,906-23,910,921 | - | C1H7g13190 | CX7g048603 | LOC_Os07g48244 | Os07g0680300 | - | Detail |
| C2H7g24468 | 7:23,915,348-23,917,291 | - | C1H7g01118 | CX7g047556 | LOC_Os07g48260 | Os07g0680400 | WRKY47, OsWRKY47 | Detail |
| C2H7g00831 | 7:23,919,303-23,931,167 | - | C1H7g04006 | CX7g047252 | LOC_Os07g48270 | Os07g0680500 | OsCHR739, CHR739 | Detail |
| C2H7g24446 | 7:23,933,341-23,936,886 | - | C1H7g12170 | CX7g049761 | LOC_Os07g48280 | Os07g0680600 | - | Detail |
| C2H7g11793 | 7:23,939,622-23,943,384 | + | C1H7g12984 | CX7g047922 | LOC_Os07g48290 | Os07g0680900 | OsAGC14 | Detail |
| C2H7g03954 | 7:23,943,611-23,946,728 | - | C1H7g30716 | CX7g048000 | LOC_Os07g48300 | Os07g0681000 | - | Detail |
| C2H7g19663 | 7:23,947,264-23,952,119 | - | C1H7g13736 | CX7g047134 | LOC_Os07g48310 | Os07g0681100 | - | Detail |
| C2H7g11337 | 7:23,963,704-23,965,391 | + | C1H7g20020 | CX7g050203 | LOC_Os07g48320 | Os07g0681200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |