| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02805 | 3:8,495,411-8,498,787 | + | C2H3g19709 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C1H3g19384 | 3:8,501,589-8,503,927 | + | C2H3g01163 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C1H3g05247 | 3:8,508,143-8,509,087 | - | C2H3g30239 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C1H3g09869 | 3:8,510,401-8,517,214 | - | C2H3g10844 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C1H3g20489 | 3:8,518,066-8,520,873 | - | C2H3g22572 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C1H3g05953 | 3:8,528,301-8,530,820 | + | C2H3g23238 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C1H3g23808 | 3:8,531,055-8,537,416 | - | C2H3g13223 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C1H3g08368 | 3:8,542,023-8,546,702 | - | C2H3g28841 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C1H3g04312 | 3:8,549,633-8,551,996 | + | C2H3g02883 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g07058 | 3:8,557,281-8,559,581 | + | C2H3g04384 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g16432 | 3:8,567,232-8,573,375 | - | - | CX3g026382 | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| C1H3g15208 | 3:8,591,799-8,593,016 | + | C2H3g12675 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C1H3g13015 | 3:8,593,398-8,595,902 | - | C2H3g17220 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C1H3g25350 | 3:8,596,431-8,600,838 | + | C2H3g11550 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C1H3g12499 | 3:8,600,406-8,605,326 | - | C2H3g03924 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C1H3g23272 | 3:8,607,231-8,611,124 | - | C2H5g03493 | CX3g030233 | LOC_Os07g15980 | Os05g0193800 | - | Detail |
| C1H3g00300 | 3:8,616,097-8,616,946 | - | - | - | - | - | - | Detail |
| C1H3g26286 | 3:8,619,041-8,621,151 | - | C2H3g13775 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| C1H3g04825 | 3:8,622,727-8,625,392 | + | C2H3g16412 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C1H3g31389 | 3:8,626,250-8,628,390 | - | C2H3g25427 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13369 | 1:25,746,666-25,747,288 | - | C1H1g25912 | CX1g006665 | LOC_Os01g50290 | Os01g0697700 | - | Detail |
| C2H1g28295 | 1:25,756,193-25,761,584 | + | C1H1g00835 | CX1g002329 | LOC_Os01g50320 | Os01g0698100 | - | Detail |
| C2H1g16612 | 1:25,763,598-25,768,019 | + | C1H1g04459 | CX1g000760 | LOC_Os01g50340 | Os01g0698300 | - | Detail |
| C2H1g21203 | 1:25,801,068-25,802,429 | + | C1H1g20270 | CX1g005385 | LOC_Os01g50370 | Os01g0699100 | OsMAPKKK63 | Detail |
| C2H1g26478 | 1:25,816,941-25,818,477 | - | C1H1g31868 | CX1g006267 | LOC_Os01g50410 | Os01g0699500 | OsMKKK70 | Detail |
| C2H1g04109 | 1:25,823,112-25,824,716 | - | C1H1g30510 | CX1g004661 | LOC_Os01g50420 | Os01g0699600 | MKKK62 | Detail |
| C2H1g22058 | 1:25,829,363-25,829,624 | + | C1H1g10125 | - | LOC_Os01g50430 | - | - | Detail |
| C2H1g24593 | 1:25,831,535-25,832,392 | + | C1H1g24072 | CX1g001816 | LOC_Os01g50440 | Os01g0699900 | - | Detail |
| C2H1g02985 | 1:25,844,072-25,845,268 | + | C1H1g23581 | CX1g001717 | LOC_Os01g50450 | Os01g0700000 | - | Detail |
| C2H1g06417 | 1:25,849,331-25,850,654 | + | C1H1g27989 | CX1g003134 | LOC_Os01g50460 | Os01g0700100 | - | Detail |
| C2H1g25689 | 1:25,851,860-25,857,586 | + | C1H1g17202 | CX1g003322 | LOC_Os01g50470 | Os01g0700200 | - | Detail |
| C2H1g26664 | 1:25,858,428-25,859,912 | - | C1H1g19643 | CX1g002074 | LOC_Os01g50480 | Os01g0701700 | - | Detail |
| C2H1g16684 | 1:25,865,887-25,867,553 | + | C1H1g22663 | CX1g003729 | LOC_Os01g50490 | Os01g0700500 | - | Detail |
| C2H1g15498 | 1:25,878,092-25,883,775 | + | C1H1g11954 | CX1g003918 | LOC_Os01g50520 | Os01g0700900 | SLB1, Os1900, CYP711A2 | Detail |
| C2H1g26426 | 1:25,889,505-25,892,517 | + | C1H1g02653 | CX1g003918 | LOC_Os01g50590 | Os01g0701500 | Os1500, CYP711A4 | Detail |
| C2H1g17786 | 1:25,895,213-25,896,432 | - | C1H1g05936 | CX1g002571 | LOC_Os01g50610 | Os01g0701700 | - | Detail |
| C2H1g19350 | 1:25,911,567-25,915,729 | - | C1H1g20752 | CX1g004457 | LOC_Os01g50616 | Os01g0701900 | OsSec14-2 | Detail |
| C2H1g18139 | 1:25,920,417-25,923,188 | - | C1H1g26463 | CX1g004072 | LOC_Os01g50622 | Os01g0702000 | - | Detail |
| C2H1g28854 | 1:25,931,084-25,931,654 | + | C1H1g00484 | CX1g003239 | LOC_Os01g50680 | Os01g0702300 | - | Detail |
| C2H1g10406 | 1:25,932,724-25,935,059 | + | C1H1g05751 | CX1g003239 | LOC_Os01g50680 | Os01g0702300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |