| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g02805 | 3:8,495,411-8,498,787 | + | C2H3g19709 | CX3g031048 | LOC_Os03g17240 | Os03g0281000 | - | Detail |
| C1H3g19384 | 3:8,501,589-8,503,927 | + | C2H3g01163 | CX3g028226 | LOC_Os03g17250 | Os03g0281100 | - | Detail |
| C1H3g05247 | 3:8,508,143-8,509,087 | - | C2H3g30239 | CX3g026165 | LOC_Os03g17260 | Os03g0281201 | - | Detail |
| C1H3g09869 | 3:8,510,401-8,517,214 | - | C2H3g10844 | CX3g025004 | LOC_Os03g17270 | Os03g0281300 | - | Detail |
| C1H3g20489 | 3:8,518,066-8,520,873 | - | C2H3g22572 | CX3g030681 | LOC_Os03g14100 | Os03g0378500 | Os2R_MYB37 | Detail |
| C1H3g05953 | 3:8,528,301-8,530,820 | + | C2H3g23238 | CX3g030928 | LOC_Os03g17300 | Os03g0281500 | OsCrRLK1L7 | Detail |
| C1H3g23808 | 3:8,531,055-8,537,416 | - | C2H3g13223 | CX3g030523 | LOC_Os03g17310 | Os03g0281600 | OsECA1 | Detail |
| C1H3g08368 | 3:8,542,023-8,546,702 | - | C2H3g28841 | CX3g026907 | LOC_Os03g17340 | Os03g0281800 | - | Detail |
| C1H3g04312 | 3:8,549,633-8,551,996 | + | C2H3g02883 | CX3g027101 | LOC_Os03g17350 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g07058 | 3:8,557,281-8,559,581 | + | C2H3g04384 | CX3g025177 | LOC_Os03g17370 | Os03g0281900 | ABCG5, OsABCG5, RCN1/OsABCG5 | Detail |
| C1H3g16432 | 3:8,567,232-8,573,375 | - | - | CX3g026382 | LOC_Os03g17410 | Os03g0282232 | - | Detail |
| C1H3g15208 | 3:8,591,799-8,593,016 | + | C2H3g12675 | CX3g027572 | LOC_Os03g17432 | Os03g0282700 | - | Detail |
| C1H3g13015 | 3:8,593,398-8,595,902 | - | C2H3g17220 | CX3g026586 | LOC_Os03g17440 | Os03g0282800 | - | Detail |
| C1H3g25350 | 3:8,596,431-8,600,838 | + | C2H3g11550 | CX3g027144 | LOC_Os03g17450 | Os03g0282900 | - | Detail |
| C1H3g12499 | 3:8,600,406-8,605,326 | - | C2H3g03924 | CX3g029922 | LOC_Os03g17470 | Os03g0283100 | - | Detail |
| C1H3g23272 | 3:8,607,231-8,611,124 | - | C2H5g03493 | CX3g030233 | LOC_Os07g15980 | Os05g0193800 | - | Detail |
| C1H3g00300 | 3:8,616,097-8,616,946 | - | - | - | - | - | - | Detail |
| C1H3g26286 | 3:8,619,041-8,621,151 | - | C2H3g13775 | CX3g029922 | LOC_Os03g17480 | Os03g0283200 | - | Detail |
| C1H3g04825 | 3:8,622,727-8,625,392 | + | C2H3g16412 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C1H3g31389 | 3:8,626,250-8,628,390 | - | C2H3g25427 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g13564 | 6:15,363,948-15,364,406 | + | - | CX6g043769 | LOC_Os06g23050 | - | - | Detail |
| C2H6g10740 | 6:15,434,160-15,434,378 | - | - | - | - | - | - | Detail |
| C2H6g09840 | 6:15,434,436-15,434,633 | - | - | - | - | - | - | Detail |
| C2H6g21569 | 6:15,436,329-15,439,376 | - | C1H6g30468 | CX6g041434 | LOC_Os06g22980 | Os06g0336500 | OsCSLD5 | Detail |
| C2H6g15145 | 6:15,443,572-15,444,963 | - | C1H6g14396 | CX6g043929 | LOC_Os06g22960 | Os06g0336200 | - | Detail |
| C2H6g06420 | 6:15,470,857-15,472,859 | - | C1H6g08313 | CX6g042107 | LOC_Os06g22919 | Os06g0335975 | - | Detail |
| C2H6g04469 | 6:15,483,385-15,483,738 | + | C1H6g08872 | CX6g044968 | LOC_Os06g22880 | - | - | Detail |
| C2H6g22727 | 6:15,497,300-15,500,514 | - | C1H6g29665 | CX6g041410 | LOC_Os06g22870 | Os06g0335500 | - | Detail |
| C2H6g26630 | 6:15,538,630-15,538,890 | - | - | CX6g044983 | LOC_Os06g22850 | Os06g0335101 | MFAP1 | Detail |
| C2H6g11989 | 6:15,555,338-15,559,097 | + | C1H6g29334 | CX6g042225 | LOC_Os06g22820 | Os06g0334400 | - | Detail |
| C2H6g24500 | 6:15,560,416-15,564,682 | - | C1H6g03947 | CX6g043751 | LOC_Os06g22810 | Os06g0334300 | - | Detail |
| C2H6g14344 | 6:15,625,672-15,631,940 | - | - | CX6g043449 | - | Os06g0333600 | - | Detail |
| C2H6g16649 | 6:15,642,457-15,648,605 | + | C1H6g24465 | CX6g042196 | LOC_Os06g22700 | Os06g0332900 | - | Detail |
| C2H6g00706 | 6:15,657,720-15,659,851 | + | C1H6g09061 | CX6g045721 | LOC_Os06g22690 | Os06g0332800 | - | Detail |
| C2H6g06753 | 6:15,663,248-15,672,432 | + | C1H6g07272 | CX6g045726 | LOC_Os06g22670 | Os06g0332700 | - | Detail |
| C2H6g22301 | 6:15,670,670-15,673,998 | - | C1H6g15783 | CX6g043543 | LOC_Os06g22660 | Os06g0332600 | - | Detail |
| C2H6g09049 | 6:15,679,493-15,679,750 | + | C1H6g12037 | CX6g044702 | LOC_Os06g22654 | Os06g0332500 | - | Detail |
| C2H6g08521 | 6:15,683,298-15,691,543 | - | C1H6g19506 | CX6g042511 | LOC_Os06g22650 | Os06g0332400 | - | Detail |
| C2H6g13258 | 6:15,757,019-15,758,405 | - | C1H6g20948 | - | LOC_Os06g30760 | - | - | Detail |
| C2H6g12922 | 6:15,767,328-15,771,643 | - | C1H6g10286 | CX6g042971 | LOC_Os06g30750 | Os06g0503400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |