| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g16199 | 3:8,341,674-8,344,532 | + | C2H3g17017 | CX3g030195 | LOC_Os03g17030 | Os03g0278500 | - | Detail |
| C1H3g31491 | 3:8,357,161-8,365,901 | + | C2H3g02257 | CX3g025742 | LOC_Os03g17050 | Os03g0278700 | - | Detail |
| C1H3g01943 | 3:8,366,949-8,368,202 | - | C2H3g24586 | CX3g027653 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| C1H3g21484 | 3:8,369,148-8,369,780 | - | C2H3g27921 | CX3g028557 | LOC_Os03g17070 | Os03g0278900 | - | Detail |
| C1H3g21261 | 3:8,370,220-8,373,510 | + | C2H3g12181 | CX3g025758 | LOC_Os03g17060 | Os03g0278800 | - | Detail |
| C1H3g00735 | 3:8,375,657-8,376,243 | - | C2H3g30418 | CX3g029719 | LOC_Os03g17100 | Os03g0279200 | - | Detail |
| C1H3g01283 | 3:8,383,424-8,387,617 | - | C2H3g16393 | CX3g031018 | LOC_Os03g17120 | Os03g0279400 | - | Detail |
| C1H3g17646 | 3:8,390,064-8,396,765 | - | C2H3g23941 | CX3g028159 | LOC_Os03g17140 | Os03g0279600 | - | Detail |
| C1H3g15850 | 3:8,400,796-8,401,284 | - | C2H3g05642 | CX3g030469 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| C1H3g07795 | 3:8,413,338-8,414,465 | - | - | - | - | - | - | Detail |
| C1H3g07955 | 3:8,417,490-8,418,065 | - | C2H3g05642 | CX3g030469 | LOC_Os03g17150 | Os03g0279700 | - | Detail |
| C1H3g15555 | 3:8,429,441-8,430,100 | + | C2H3g27940 | - | - | - | - | Detail |
| C1H3g10805 | 3:8,431,138-8,437,522 | + | C2H3g08725 | CX3g028650 | LOC_Os03g17164 | Os03g0279816 | - | Detail |
| C1H3g09044 | 3:8,441,135-8,442,775 | + | C2H3g11175 | - | LOC_Os03g17170 | Os03g0279900 | - | Detail |
| C1H3g24073 | 3:8,443,404-8,445,164 | + | C2H3g19320 | - | LOC_Os03g17174 | Os03g0279950 | - | Detail |
| C1H3g05773 | 3:8,445,474-8,454,429 | - | C2H3g05359 | CX3g030780 | LOC_Os03g17180 | Os03g0280000 | - | Detail |
| C1H3g27832 | 3:8,463,341-8,464,136 | + | C2H3g01051 | - | LOC_Os03g17200 | Os03g0280400 | - | Detail |
| C1H3g22706 | 3:8,481,535-8,488,032 | + | C2H3g27265 | CX3g028994 | LOC_Os03g17210 | Os03g0280700 | - | Detail |
| C1H3g01230 | 3:8,489,776-8,490,735 | + | C2H3g20835 | CX3g029125 | LOC_Os03g17220 | Os03g0280750 | - | Detail |
| C1H3g29688 | 3:8,491,236-8,493,768 | - | C2H3g25701 | CX3g025025 | LOC_Os03g17230 | Os03g0280800 | OsUXS1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g29268 | 8:23,760,385-23,761,110 | + | - | - | - | Os08g0557150 | - | Detail |
| C2H8g08060 | 8:23,762,014-23,763,033 | - | - | CX8g053270 | - | Os08g0557200 | - | Detail |
| C2H8g03387 | 8:23,767,249-23,768,142 | + | - | CX8g053899 | LOC_Os08g44310 | Os08g0439600 | - | Detail |
| C2H8g08957 | 8:23,768,435-23,772,166 | - | C1H8g21859 | CX8g054736 | LOC_Os08g44320 | Os08g0557400 | - | Detail |
| C2H8g20180 | 8:23,772,680-23,778,104 | + | C1H8g11251 | CX8g051777 | LOC_Os08g44330 | Os08g0557500 | - | Detail |
| C2H8g20392 | 8:23,779,007-23,782,317 | + | C1H8g23781 | CX8g053200 | LOC_Os08g44340 | Os08g0557600 | - | Detail |
| C2H8g12373 | 8:23,784,089-23,788,233 | + | C1H8g01772 | CX8g051253 | LOC_Os08g44350 | Os08g0557700 | AHP1, OHP1, HPt, OsAHP1, Hpt2, Ohp1, OsHP2, OsHpt2, OsHPt2 | Detail |
| C2H8g14066 | 8:23,795,141-23,802,603 | + | C1H8g23400 | CX8g053309 | LOC_Os08g44360 | Os08g0557800 | OsFAR4 | Detail |
| C2H8g17353 | 8:23,802,856-23,806,674 | - | C1H8g28313 | CX8g052319 | LOC_Os08g44370 | Os08g0557900 | - | Detail |
| C2H8g10849 | 8:23,809,809-23,811,252 | + | C1H8g04443 | CX8g050557 | LOC_Os08g44380 | Os08g0558000 | - | Detail |
| C2H8g21533 | 8:23,815,205-23,817,532 | - | C1H8g28050 | CX8g054239 | LOC_Os08g44390 | Os08g0558100 | - | Detail |
| C2H8g14733 | 8:23,820,998-23,823,910 | + | C1H8g20889 | CX8g054438 | LOC_Os08g44400 | Os08g0558200 | OsGRX20 | Detail |
| C2H8g02947 | 8:23,824,811-23,825,389 | + | C1H8g04611 | CX8g053726 | LOC_Os08g44410 | Os08g0558300 | - | Detail |
| C2H8g21192 | 8:23,825,486-23,832,058 | - | C1H8g24914 | CX8g054401 | LOC_Os08g44420 | Os08g0558400 | - | Detail |
| C2H8g30252 | 8:23,835,531-23,837,432 | - | C1H8g29932 | CX8g054264 | LOC_Os08g44430 | Os08g0558600 | - | Detail |
| C2H8g04336 | 8:23,838,981-23,842,241 | - | C1H8g16372 | CX8g051060 | LOC_Os08g44440 | Os08g0558700 | - | Detail |
| C2H8g06651 | 8:23,842,831-23,844,712 | + | C1H8g04443 | CX8g050452 | LOC_Os08g44450 | Os08g0558800 | - | Detail |
| C2H8g25969 | 8:23,846,560-23,849,000 | + | C1H8g25891 | CX8g051182 | LOC_Os08g44460 | Os08g0558900 | IF1-1, IF<sub>1</sub>-1 | Detail |
| C2H8g25077 | 8:23,850,128-23,851,984 | - | C1H8g15584 | CX8g051182 | LOC_Os08g44470 | Os08g0559000 | - | Detail |
| C2H8g13180 | 8:23,853,024-23,854,625 | + | C1H8g09492 | CX8g052056 | LOC_Os08g44480 | Os08g0559200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |