| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g29048 | 3:8,177,431-8,180,281 | - | C2H3g22357 | CX3g028725 | LOC_Os03g16800 | Os03g0275500 | - | Detail |
| C1H3g12563 | 3:8,189,017-8,189,417 | + | - | - | - | Os03g0275800 | - | Detail |
| C1H3g28405 | 3:8,191,144-8,196,620 | + | C2H3g09736 | CX3g030952 | LOC_Os03g16824 | Os03g0275900 | - | Detail |
| C1H3g20662 | 3:8,235,703-8,237,171 | - | C2H3g10703 | CX3g029620 | LOC_Os03g16850 | Os03g0276300 | - | Detail |
| C1H3g15079 | 3:8,246,259-8,249,439 | + | C2H3g25748 | CX3g026076 | LOC_Os03g16860 | Os03g0276500 | - | Detail |
| C1H3g15631 | 3:8,249,766-8,252,174 | - | C2H3g05747 | CX3g028681 | LOC_Os03g16870 | Os03g0276600 | - | Detail |
| C1H3g26015 | 3:8,252,311-8,253,873 | + | C2H3g19968 | CX3g027299 | LOC_Os03g16874 | Os03g0276700 | - | Detail |
| C1H3g01693 | 3:8,254,405-8,255,569 | - | C2H3g18002 | CX3g027761 | LOC_Os03g16880 | Os03g0276800 | - | Detail |
| C1H3g30543 | 3:8,261,162-8,262,272 | - | C2H3g18002 | CX3g030385 | LOC_Os03g16880 | Os03g0276800 | - | Detail |
| C1H3g16525 | 3:8,262,830-8,266,992 | - | C2H3g17099 | CX3g030171 | LOC_Os03g16890 | Os03g0276900 | - | Detail |
| C1H3g14663 | 3:8,271,419-8,274,541 | - | C2H3g11000 | CX3g026295 | LOC_Os03g16900 | Os03g0277000 | OsGDI3 | Detail |
| C1H3g00724 | 3:8,285,807-8,287,426 | + | C2H3g13683 | CX3g025051 | LOC_Os03g16910 | Os03g0277100 | - | Detail |
| C1H3g31204 | 3:8,295,095-8,297,695 | - | C2H3g22367 | CX3g029302 | LOC_Os03g16920 | Os03g0277300 | - | Detail |
| C1H3g11982 | 3:8,300,350-8,301,366 | - | C2H3g22094 | CX3g027598 | LOC_Os03g16940 | Os03g0277500 | OsGLYI3 | Detail |
| C1H3g12989 | 3:8,303,478-8,304,370 | - | C2H3g14605 | CX3g029379 | LOC_Os03g16950 | Os03g0277600 | - | Detail |
| C1H3g21064 | 3:8,307,559-8,308,367 | - | C2H3g07396 | CX3g026822 | LOC_Os03g16960 | Os03g0277700 | - | Detail |
| C1H3g04687 | 3:8,317,253-8,321,376 | + | C2H3g01539 | CX3g030561 | LOC_Os03g16980 | Os03g0278000 | - | Detail |
| C1H3g07237 | 3:8,325,344-8,328,806 | + | C2H3g08917 | CX3g025505 | LOC_Os03g17000 | Os03g0278200 | - | Detail |
| C1H3g25194 | 3:8,329,508-8,333,040 | - | C2H3g03680 | CX3g027017 | LOC_Os03g17010 | Os03g0278300 | - | Detail |
| C1H3g03328 | 3:8,335,486-8,338,716 | - | C2H3g05174 | CX3g030797 | LOC_Os03g17020 | Os03g0278400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g20868 | 1:13,450,520-13,452,544 | - | - | - | - | Os01g0363950 | - | Detail |
| C2H1g23536 | 1:13,466,336-13,470,655 | + | C1H1g24145 | CX1g003575 | LOC_Os01g26174 | Os01g0364100 | - | Detail |
| C2H1g08431 | 1:13,500,059-13,502,591 | + | C1H1g15351 | CX1g003575 | LOC_Os01g26280 | Os01g0364800 | - | Detail |
| C2H1g01263 | 1:13,503,741-13,504,202 | - | - | CX1g006377 | - | - | - | Detail |
| C2H1g09218 | 1:13,511,084-13,513,790 | - | C1H1g00820 | CX1g000721 | LOC_Os01g26300 | Os01g0365000 | - | Detail |
| C2H1g10812 | 1:13,527,952-13,528,373 | - | C1H1g31120 | CX1g002129 | LOC_Os01g26310 | Os01g0365000 | - | Detail |
| C2H1g14612 | 1:13,547,883-13,550,252 | + | C1H1g24989 | CX1g000363 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g19606 | 1:13,550,254-13,551,390 | + | C1H1g24989 | CX1g003444 | LOC_Os01g26320 | Os01g0365300 | - | Detail |
| C2H1g05597 | 1:13,561,516-13,563,405 | + | C1H1g13742 | CX1g002863 | LOC_Os01g26340 | Os01g0351500 | - | Detail |
| C2H1g01583 | 1:13,586,152-13,588,029 | + | - | - | - | Os10g0340100 | - | Detail |
| C2H1g08702 | 1:13,648,948-13,652,151 | + | C1H1g28775 | CX1g000084 | LOC_Os01g26390 | Os01g0366300 | Gnk2RLK-1 | Detail |
| C2H1g28276 | 1:13,653,448-13,655,490 | + | - | - | - | - | - | Detail |
| C2H1g18380 | 1:13,683,525-13,684,394 | - | C1H1g08262 | CX1g002303 | LOC_Os01g26920 | Os01g0367100 | - | Detail |
| C2H1g06533 | 1:13,687,142-13,688,920 | - | C1H1g25979 | CX1g004427 | LOC_Os01g26970 | Os01g0367100 | - | Detail |
| C2H1g18954 | 1:13,693,647-13,699,807 | - | C1H1g15445 | CX1g006237 | LOC_Os01g26940 | Os01g0367300 | - | Detail |
| C2H1g00335 | 1:13,704,344-13,708,942 | - | C1H1g15374 | CX1g002303 | LOC_Os01g26970 | Os01g0367400 | - | Detail |
| C2H1g03369 | 1:13,731,084-13,738,099 | + | C1H1g21458 | CX1g003934 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| C2H1g04184 | 1:13,745,523-13,752,855 | - | C1H1g24923 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C2H1g05311 | 1:13,771,028-13,772,062 | + | C1H1g29900 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C2H1g23898 | 1:13,791,146-13,803,780 | - | C1H1g21071 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |