| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g23817 | 3:7,985,789-7,991,423 | + | C2H3g26882 | CX3g030405 | LOC_Os03g16440 | Os03g0271200 | - | Detail |
| C1H3g23484 | 3:7,991,896-7,993,305 | + | C2H3g19632 | CX3g027711 | LOC_Os03g16450 | Os03g0271300 | - | Detail |
| C1H3g07914 | 3:7,993,808-7,997,939 | - | C2H3g27304 | CX3g030348 | LOC_Os03g16460 | Os03g0271400 | - | Detail |
| C1H3g07286 | 3:7,998,278-7,998,943 | + | C2H3g08754 | CX3g027827 | LOC_Os03g16470 | Os03g0271500 | - | Detail |
| C1H3g24126 | 3:8,002,696-8,003,535 | + | C2H3g12514 | CX3g027903 | LOC_Os03g16480 | Os03g0271600 | - | Detail |
| C1H3g27178 | 3:8,010,932-8,012,269 | + | C2H3g28191 | CX3g028371 | LOC_Os03g16500 | Os03g0271900 | - | Detail |
| C1H3g08714 | 3:8,016,201-8,018,969 | + | C2H3g14243 | CX3g029063 | LOC_Os03g16570 | Os03g0272300 | OsSDIR1 | Detail |
| C1H3g26204 | 3:8,021,488-8,026,296 | + | C2H3g29860 | CX3g029825 | LOC_Os03g16580 | Os03g0272400 | - | Detail |
| C1H3g01466 | 3:8,038,604-8,038,903 | - | C2H3g08510 | CX3g025184 | LOC_Os03g16600 | Os03g0272900 | - | Detail |
| C1H3g27326 | 3:8,046,393-8,048,998 | - | C2H3g05813 | CX3g029074 | LOC_Os03g16610 | Os03g0273200 | - | Detail |
| C1H3g20619 | 3:8,057,384-8,067,855 | + | C2H3g18809 | CX3g029547 | LOC_Os03g18060 | - | - | Detail |
| C1H3g14918 | 3:8,068,365-8,069,341 | + | C2H3g10490 | CX3g029547 | - | - | - | Detail |
| C1H3g04298 | 3:8,077,706-8,079,164 | + | C2H3g16464 | CX3g027726 | LOC_Os03g16670 | Os03g0273800 | OsHAD3 | Detail |
| C1H3g26678 | 3:8,092,166-8,097,553 | + | C2H3g21796 | CX3g025279 | LOC_Os03g16690 | Os03g0274000 | - | Detail |
| C1H3g14789 | 3:8,117,410-8,122,659 | + | C2H3g00969 | CX3g027149 | LOC_Os03g16700 | Os03g0274300 | - | Detail |
| C1H3g26177 | 3:8,128,910-8,131,947 | + | C2H3g06926 | CX3g026360 | LOC_Os03g16730 | Os03g0274700 | - | Detail |
| C1H3g25668 | 3:8,132,194-8,135,501 | - | C2H3g23241 | CX3g025011 | LOC_Os03g16740 | Os03g0274800 | OsRLCK107 | Detail |
| C1H3g02943 | 3:8,146,268-8,149,116 | + | C2H3g07201 | CX3g028865 | LOC_Os03g16760 | Os03g0275100 | - | Detail |
| C1H3g20146 | 3:8,158,183-8,161,356 | - | C2H3g02844 | CX3g026629 | LOC_Os03g16780 | Os03g0275300 | - | Detail |
| C1H3g08484 | 3:8,170,456-8,174,921 | + | C2H3g23962 | CX3g026595 | LOC_Os03g16790 | Os03g0275400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g05175 | 12:18,612,120-18,614,699 | - | C1H12g27529 | CX12g016909 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| C2H12g12611 | 12:18,643,871-18,645,485 | + | C1H12g15786 | CX12g015364 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| C2H12g17412 | 12:18,651,995-18,655,567 | + | C1H12g29275 | - | - | - | - | Detail |
| C2H12g05930 | 12:18,655,623-18,659,418 | + | C1H12g29275 | CX12g016435 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| C2H12g03052 | 12:18,663,825-18,666,317 | + | C1H12g24562 | CX12g015172 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| C2H12g02154 | 12:18,669,185-18,672,797 | - | C1H12g15410 | CX12g018213 | LOC_Os12g36690 | Os12g0516300 | - | Detail |
| C2H12g06633 | 12:18,675,354-18,675,587 | + | C1H12g01930 | CX12g016931 | - | - | - | Detail |
| C2H12g27584 | 12:18,684,117-18,686,666 | + | C1H12g05813 | - | LOC_Os12g36740 | Os12g0516700 | - | Detail |
| C2H12g15252 | 12:18,688,119-18,691,324 | - | C1H12g29363 | CX12g016031 | LOC_Os12g36750 | Os12g0516800 | - | Detail |
| C2H12g14585 | 12:18,696,663-18,706,850 | - | C1H12g01446 | CX12g016097 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| C2H12g15590 | 12:18,708,188-18,712,821 | - | C1H12g23720 | CX12g016599 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| C2H12g04076 | 12:18,735,632-18,739,412 | + | C1H12g01737 | CX12g018046 | LOC_Os12g36810 | Os12g0554800 | - | Detail |
| C2H12g06219 | 12:18,744,095-18,744,872 | + | C1H12g12652 | - | LOC_Os12g36830 | Os12g0555000 | RSOsPR10 | Detail |
| C2H12g04688 | 12:18,748,457-18,749,381 | + | C1H12g26248 | - | LOC_Os12g36840 | Os12g0555100 | - | Detail |
| C2H12g04650 | 12:18,755,015-18,756,454 | + | C1H12g09962 | - | LOC_Os12g36850 | Os12g0555200 | RPR10b | Detail |
| C2H12g30203 | 12:18,760,122-18,761,122 | + | C1H12g15174 | - | LOC_Os12g36860 | Os12g0555300 | RPR10c | Detail |
| C2H12g14119 | 12:18,763,230-18,764,525 | + | C1H12g06069 | - | LOC_Os12g36880 | Os12g0555500 | OsPR10a, PBZ1 | Detail |
| C2H12g14752 | 12:18,767,562-18,772,083 | - | C1H12g31071 | CX12g016121 | LOC_Os12g36890 | Os12g0555600 | ND1, CSLD4, OsCSLD4, OsCD1, CD1, SPO1 | Detail |
| C2H12g19509 | 12:18,780,869-18,785,650 | + | C1H12g15134 | CX12g015599 | LOC_Os12g36900 | Os12g0556100 | - | Detail |
| C2H12g19756 | 12:18,792,886-18,797,069 | + | C1H12g31407 | CX12g016424 | LOC_Os12g36910 | Os12g0556200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |