| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g23817 | 3:7,985,789-7,991,423 | + | C2H3g26882 | CX3g030405 | LOC_Os03g16440 | Os03g0271200 | - | Detail |
| C1H3g23484 | 3:7,991,896-7,993,305 | + | C2H3g19632 | CX3g027711 | LOC_Os03g16450 | Os03g0271300 | - | Detail |
| C1H3g07914 | 3:7,993,808-7,997,939 | - | C2H3g27304 | CX3g030348 | LOC_Os03g16460 | Os03g0271400 | - | Detail |
| C1H3g07286 | 3:7,998,278-7,998,943 | + | C2H3g08754 | CX3g027827 | LOC_Os03g16470 | Os03g0271500 | - | Detail |
| C1H3g24126 | 3:8,002,696-8,003,535 | + | C2H3g12514 | CX3g027903 | LOC_Os03g16480 | Os03g0271600 | - | Detail |
| C1H3g27178 | 3:8,010,932-8,012,269 | + | C2H3g28191 | CX3g028371 | LOC_Os03g16500 | Os03g0271900 | - | Detail |
| C1H3g08714 | 3:8,016,201-8,018,969 | + | C2H3g14243 | CX3g029063 | LOC_Os03g16570 | Os03g0272300 | OsSDIR1 | Detail |
| C1H3g26204 | 3:8,021,488-8,026,296 | + | C2H3g29860 | CX3g029825 | LOC_Os03g16580 | Os03g0272400 | - | Detail |
| C1H3g01466 | 3:8,038,604-8,038,903 | - | C2H3g08510 | CX3g025184 | LOC_Os03g16600 | Os03g0272900 | - | Detail |
| C1H3g27326 | 3:8,046,393-8,048,998 | - | C2H3g05813 | CX3g029074 | LOC_Os03g16610 | Os03g0273200 | - | Detail |
| C1H3g20619 | 3:8,057,384-8,067,855 | + | C2H3g18809 | CX3g029547 | LOC_Os03g18060 | - | - | Detail |
| C1H3g14918 | 3:8,068,365-8,069,341 | + | C2H3g10490 | CX3g029547 | - | - | - | Detail |
| C1H3g04298 | 3:8,077,706-8,079,164 | + | C2H3g16464 | CX3g027726 | LOC_Os03g16670 | Os03g0273800 | OsHAD3 | Detail |
| C1H3g26678 | 3:8,092,166-8,097,553 | + | C2H3g21796 | CX3g025279 | LOC_Os03g16690 | Os03g0274000 | - | Detail |
| C1H3g14789 | 3:8,117,410-8,122,659 | + | C2H3g00969 | CX3g027149 | LOC_Os03g16700 | Os03g0274300 | - | Detail |
| C1H3g26177 | 3:8,128,910-8,131,947 | + | C2H3g06926 | CX3g026360 | LOC_Os03g16730 | Os03g0274700 | - | Detail |
| C1H3g25668 | 3:8,132,194-8,135,501 | - | C2H3g23241 | CX3g025011 | LOC_Os03g16740 | Os03g0274800 | OsRLCK107 | Detail |
| C1H3g02943 | 3:8,146,268-8,149,116 | + | C2H3g07201 | CX3g028865 | LOC_Os03g16760 | Os03g0275100 | - | Detail |
| C1H3g20146 | 3:8,158,183-8,161,356 | - | C2H3g02844 | CX3g026629 | LOC_Os03g16780 | Os03g0275300 | - | Detail |
| C1H3g08484 | 3:8,170,456-8,174,921 | + | C2H3g23962 | CX3g026595 | LOC_Os03g16790 | Os03g0275400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g21818 | 8:21,278,483-21,280,492 | + | C1H8g00918 | CX8g052900 | LOC_Os08g39630 | Os08g0506700 | OsFBH1, POH1 | Detail |
| C2H8g10072 | 8:21,295,505-21,297,031 | + | C1H8g02946 | CX8g053330 | LOC_Os08g39694 | Os08g0507000 | - | Detail |
| C2H8g30284 | 8:21,313,645-21,315,171 | + | C1H8g02946 | CX8g052494 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g26138 | 8:21,322,863-21,324,395 | + | C1H8g02946 | CX8g053518 | LOC_Os08g39730 | Os08g0508000 | CYP76C6 | Detail |
| C2H8g03218 | 8:21,324,619-21,327,496 | - | C1H8g28706 | CX8g053499 | LOC_Os08g39740 | Os08g0508100 | - | Detail |
| C2H8g14917 | 8:21,336,534-21,341,315 | - | C1H8g26764 | CX8g054344 | LOC_Os08g39810 | Os08g0508500 | - | Detail |
| C2H8g11766 | 8:21,345,280-21,347,819 | + | C1H8g11318 | CX8g053265 | LOC_Os08g39820 | Os08g0508600 | - | Detail |
| C2H8g22017 | 8:21,350,208-21,352,058 | + | C1H8g03168 | CX8g054476 | LOC_Os08g39830 | Os08g0508700 | - | Detail |
| C2H8g14861 | 8:21,355,672-21,360,638 | - | C1H8g18312 | CX8g054768 | LOC_Os08g39840 | Os08g0508800 | OsHI-LOX | Detail |
| C2H8g19828 | 8:21,373,139-21,381,558 | + | C1H8g17933 | CX8g050519 | LOC_Os08g39840 | Os08g0509100 | - | Detail |
| C2H8g21670 | 8:21,381,741-21,386,155 | - | C1H8g19400 | CX8g053424 | LOC_Os08g39860 | Os08g0509200 | - | Detail |
| C2H8g14320 | 8:21,395,983-21,401,382 | - | C1H8g14217 | CX8g050462 | LOC_Os08g39870 | Os08g0509400 | - | Detail |
| C2H8g18791 | 8:21,402,713-21,405,780 | + | C1H8g31122 | CX8g052395 | LOC_Os08g39880 | Os08g0509500 | - | Detail |
| C2H8g07989 | 8:21,407,747-21,408,052 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28923 | 8:21,408,776-21,411,165 | - | C1H8g04991 | CX8g052375 | LOC_Os08g39890 | Os08g0509600 | WFP, OsSPL14, SPL14, IPA1, WFP/IPA1 | Detail |
| C2H8g28069 | 8:21,431,029-21,431,957 | - | C1H8g16265 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g16182 | 8:21,432,150-21,432,624 | - | C1H8g23320 | CX8g051662 | LOC_Os08g39940 | Os08g0510101 | - | Detail |
| C2H8g05100 | 8:21,434,040-21,438,479 | + | C1H8g13339 | CX8g051410 | LOC_Os08g39950 | Os08g0510300 | OsHAK26 | Detail |
| C2H8g30189 | 8:21,438,689-21,441,258 | - | C1H8g11932 | CX8g051070 | LOC_Os08g39960 | Os08g0510400 | - | Detail |
| C2H8g03377 | 8:21,442,329-21,445,614 | + | C1H8g17932 | CX8g053229 | LOC_Os08g39970 | Os08g0510500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |