| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04069 | 3:7,852,902-7,856,449 | + | C2H3g07700 | CX3g026311 | LOC_Os03g16110 | Os03g0268000 | - | Detail |
| C1H3g00060 | 3:7,861,163-7,864,757 | - | C2H3g30042 | CX3g028752 | LOC_Os03g16120 | Os03g0268100 | - | Detail |
| C1H3g17480 | 3:7,867,388-7,873,049 | - | C2H3g28116 | CX3g026518 | LOC_Os03g16130 | Os03g0268200 | - | Detail |
| C1H3g03581 | 3:7,874,585-7,877,206 | - | C2H3g23231 | CX3g027084 | LOC_Os03g16140 | Os03g0268300 | - | Detail |
| C1H3g26709 | 3:7,880,790-7,884,197 | - | C2H3g04060 | CX3g026984 | LOC_Os03g16150 | Os03g0268400 | - | Detail |
| C1H3g06011 | 3:7,895,531-7,897,545 | - | C2H3g09098 | CX3g029114 | LOC_Os03g16170 | Os03g0268600 | - | Detail |
| C1H3g13406 | 3:7,910,047-7,910,457 | - | - | CX3g025828 | - | - | - | Detail |
| C1H3g02392 | 3:7,911,136-7,913,409 | - | C2H3g08488 | CX3g025893 | LOC_Os03g16210 | Os03g0268900 | - | Detail |
| C1H3g25433 | 3:7,916,576-7,918,948 | - | C2H3g11149 | CX3g025893 | LOC_Os03g16220 | Os03g0269000 | - | Detail |
| C1H3g14634 | 3:7,921,134-7,922,833 | - | C2H3g13848 | CX3g030778 | LOC_Os03g16230 | Os03g0269100 | - | Detail |
| C1H3g28190 | 3:7,923,607-7,926,443 | - | C2H3g30194 | CX3g025228 | LOC_Os03g16260 | Os03g0269300 | - | Detail |
| C1H3g05319 | 3:7,932,422-7,938,151 | + | C2H3g10990 | CX3g030432 | LOC_Os03g16290 | Os03g0269700 | OsSSR1 | Detail |
| C1H3g25495 | 3:7,939,994-7,944,266 | + | C2H3g12278 | CX3g028676 | LOC_Os03g16334 | Os03g0269900 | - | Detail |
| C1H3g15219 | 3:7,949,670-7,950,446 | + | C2H3g26039 | CX3g030836 | LOC_Os03g16350 | Os03g0270000 | OsAHL7 | Detail |
| C1H3g02158 | 3:7,957,906-7,964,213 | - | C2H3g09590 | - | LOC_Os03g16369 | Os03g0270200 | - | Detail |
| C1H3g05957 | 3:7,961,121-7,961,549 | + | C2H3g23864 | CX3g031331 | - | Os03g0270300 | - | Detail |
| C1H3g05634 | 3:7,968,821-7,970,242 | - | C2H3g17998 | CX3g029608 | LOC_Os03g16390 | Os03g0270500 | - | Detail |
| C1H3g18450 | 3:7,974,389-7,978,225 | + | C2H3g10987 | CX3g031177 | LOC_Os03g16400 | Os01g0103800 | - | Detail |
| C1H3g20566 | 3:7,978,663-7,979,136 | - | C2H3g15886 | CX3g029680 | LOC_Os03g16410 | Os03g0270800 | - | Detail |
| C1H3g15183 | 3:7,982,072-7,985,245 | + | C2H3g30308 | CX3g026903 | LOC_Os03g16430 | Os03g0271100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02593 | 4:29,326,920-29,329,525 | - | C1H4g30864 | CX4g036239 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| C2H4g28957 | 4:29,330,937-29,334,919 | + | C1H4g09343 | CX4g033681 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| C2H4g00001 | 4:29,335,587-29,337,864 | - | C1H4g05828 | CX4g031794 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| C2H4g12242 | 4:29,346,217-29,350,384 | + | C1H4g09596 | CX4g036304 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| C2H4g11326 | 4:29,350,962-29,353,825 | + | C1H4g30725 | CX4g034037 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| C2H4g21652 | 4:29,354,782-29,355,237 | - | - | CX4g034903 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| C2H4g19860 | 4:29,362,450-29,363,014 | + | C1H4g22043 | CX4g033683 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g10951 | 4:29,379,023-29,380,236 | - | C1H4g10999 | CX4g036202 | LOC_Os04g35610 | Os04g0118700 | - | Detail |
| C2H4g15180 | 4:29,387,199-29,389,061 | + | C1H4g22979 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g00735 | 4:29,390,985-29,393,367 | + | C1H4g03241 | CX4g031479 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03747 | 4:29,396,383-29,398,015 | + | C1H4g01851 | CX4g031479 | LOC_Os04g57080 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g03474 | 4:29,400,385-29,401,819 | + | C1H4g29852 | CX4g031652 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| C2H4g06767 | 4:29,415,602-29,416,401 | - | C1H4g05569 | CX4g036468 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| C2H4g00020 | 4:29,417,068-29,427,230 | - | C1H4g31368 | CX4g031983 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| C2H4g16878 | 4:29,428,962-29,429,486 | + | - | CX4g036271 | LOC_Os04g43720 | Os04g0517600 | - | Detail |
| C2H4g20070 | 4:29,431,894-29,432,340 | - | - | - | - | - | - | Detail |
| C2H4g09686 | 4:29,431,991-29,432,428 | + | - | - | - | - | - | Detail |
| C2H4g30626 | 4:29,434,012-29,437,838 | - | C1H4g07804 | CX4g034693 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| C2H4g27314 | 4:29,439,637-29,441,953 | + | C1H4g29276 | CX4g034777 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| C2H4g03010 | 4:29,447,466-29,448,038 | - | C1H4g22147 | CX4g031690 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |