| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04069 | 3:7,852,902-7,856,449 | + | C2H3g07700 | CX3g026311 | LOC_Os03g16110 | Os03g0268000 | - | Detail |
| C1H3g00060 | 3:7,861,163-7,864,757 | - | C2H3g30042 | CX3g028752 | LOC_Os03g16120 | Os03g0268100 | - | Detail |
| C1H3g17480 | 3:7,867,388-7,873,049 | - | C2H3g28116 | CX3g026518 | LOC_Os03g16130 | Os03g0268200 | - | Detail |
| C1H3g03581 | 3:7,874,585-7,877,206 | - | C2H3g23231 | CX3g027084 | LOC_Os03g16140 | Os03g0268300 | - | Detail |
| C1H3g26709 | 3:7,880,790-7,884,197 | - | C2H3g04060 | CX3g026984 | LOC_Os03g16150 | Os03g0268400 | - | Detail |
| C1H3g06011 | 3:7,895,531-7,897,545 | - | C2H3g09098 | CX3g029114 | LOC_Os03g16170 | Os03g0268600 | - | Detail |
| C1H3g13406 | 3:7,910,047-7,910,457 | - | - | CX3g025828 | - | - | - | Detail |
| C1H3g02392 | 3:7,911,136-7,913,409 | - | C2H3g08488 | CX3g025893 | LOC_Os03g16210 | Os03g0268900 | - | Detail |
| C1H3g25433 | 3:7,916,576-7,918,948 | - | C2H3g11149 | CX3g025893 | LOC_Os03g16220 | Os03g0269000 | - | Detail |
| C1H3g14634 | 3:7,921,134-7,922,833 | - | C2H3g13848 | CX3g030778 | LOC_Os03g16230 | Os03g0269100 | - | Detail |
| C1H3g28190 | 3:7,923,607-7,926,443 | - | C2H3g30194 | CX3g025228 | LOC_Os03g16260 | Os03g0269300 | - | Detail |
| C1H3g05319 | 3:7,932,422-7,938,151 | + | C2H3g10990 | CX3g030432 | LOC_Os03g16290 | Os03g0269700 | OsSSR1 | Detail |
| C1H3g25495 | 3:7,939,994-7,944,266 | + | C2H3g12278 | CX3g028676 | LOC_Os03g16334 | Os03g0269900 | - | Detail |
| C1H3g15219 | 3:7,949,670-7,950,446 | + | C2H3g26039 | CX3g030836 | LOC_Os03g16350 | Os03g0270000 | OsAHL7 | Detail |
| C1H3g02158 | 3:7,957,906-7,964,213 | - | C2H3g09590 | - | LOC_Os03g16369 | Os03g0270200 | - | Detail |
| C1H3g05957 | 3:7,961,121-7,961,549 | + | C2H3g23864 | CX3g031331 | - | Os03g0270300 | - | Detail |
| C1H3g05634 | 3:7,968,821-7,970,242 | - | C2H3g17998 | CX3g029608 | LOC_Os03g16390 | Os03g0270500 | - | Detail |
| C1H3g18450 | 3:7,974,389-7,978,225 | + | C2H3g10987 | CX3g031177 | LOC_Os03g16400 | Os01g0103800 | - | Detail |
| C1H3g20566 | 3:7,978,663-7,979,136 | - | C2H3g15886 | CX3g029680 | LOC_Os03g16410 | Os03g0270800 | - | Detail |
| C1H3g15183 | 3:7,982,072-7,985,245 | + | C2H3g30308 | CX3g026903 | LOC_Os03g16430 | Os03g0271100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g23287 | 9:18,074,497-18,078,205 | - | C1H9g18054 | CX9g058088 | LOC_Os09g37012 | Os09g0542100 | - | Detail |
| C2H9g00368 | 9:18,082,387-18,084,718 | - | C1H9g17541 | CX9g055142 | LOC_Os09g37020 | Os09g0542200 | - | Detail |
| C2H9g15798 | 9:18,092,302-18,095,972 | + | C1H9g09227 | CX9g057132 | LOC_Os09g37040 | Os09g0542500 | - | Detail |
| C2H9g05399 | 9:18,096,779-18,098,237 | - | C1H9g10374 | CX9g057153 | LOC_Os09g37050 | Os09g0542600 | - | Detail |
| C2H9g07462 | 9:18,101,890-18,104,578 | - | C1H9g10542 | CX9g057571 | LOC_Os09g37060 | Os09g0542700 | - | Detail |
| C2H9g24102 | 9:18,108,027-18,109,667 | - | C1H9g20729 | CX9g054989 | LOC_Os09g37070 | Os09g0542800 | - | Detail |
| C2H9g30539 | 9:18,128,798-18,134,856 | + | C1H9g02114 | CX9g055681 | LOC_Os09g37100 | Os09g0543100 | - | Detail |
| C2H9g20419 | 9:18,163,287-18,164,594 | + | C1H9g14882 | CX9g056310 | LOC_Os09g37180 | Os09g0543900 | - | Detail |
| C2H9g04352 | 9:18,174,377-18,175,741 | + | C1H9g22634 | CX9g056534 | LOC_Os09g37200 | Os09g0544000 | OsPHT4 | Detail |
| C2H9g00928 | 9:18,186,499-18,193,710 | + | C1H9g07690 | CX9g057415 | LOC_Os09g37230 | Os09g0544300 | - | Detail |
| C2H9g30661 | 9:18,194,984-18,216,082 | + | C1H9g17505 | CX9g057924 | LOC_Os09g37240 | Os09g0544400 | - | Detail |
| C2H9g00491 | 9:18,216,801-18,218,600 | - | C1H9g29018 | CX9g057891 | LOC_Os09g37250 | - | - | Detail |
| C2H9g14558 | 9:18,222,568-18,223,462 | - | C1H9g19143 | CX9g057635 | LOC_Os09g37260 | Os09g0544700 | - | Detail |
| C2H9g28839 | 9:18,223,898-18,227,681 | - | C1H9g28030 | CX9g057831 | LOC_Os09g37270 | Os09g0544800 | Os RopGEF7, OsRopGEF7, OsRacGEF2 | Detail |
| C2H9g10418 | 9:18,238,093-18,242,701 | - | C1H9g26500 | CX9g056668 | LOC_Os09g37280 | Os09g0544900 | - | Detail |
| C2H9g27785 | 9:18,244,799-18,247,362 | - | C1H9g30098 | CX9g057264 | LOC_Os09g37300 | Os09g0545000 | - | Detail |
| C2H9g03269 | 9:18,258,095-18,258,485 | + | C1H9g09109 | - | LOC_Os09g37344 | Os09g0545400 | - | Detail |
| C2H9g00395 | 9:18,262,020-18,262,294 | + | C1H9g11654 | - | LOC_Os09g37369 | Os09g0545700 | - | Detail |
| C2H9g01026 | 9:18,272,829-18,273,802 | + | - | - | - | - | - | Detail |
| C2H9g10946 | 9:18,281,655-18,282,071 | + | C1H9g18140 | - | LOC_Os09g37495 | Os09g0547033 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |