| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05874 | 3:7,739,333-7,740,329 | + | - | - | LOC_Os03g13325 | - | - | Detail |
| C1H3g26269 | 3:7,743,125-7,745,957 | + | C2H3g28537 | CX3g025675 | LOC_Os03g15880 | Os03g0265500 | - | Detail |
| C1H3g21286 | 3:7,746,695-7,749,470 | - | C2H3g24360 | CX3g026951 | LOC_Os03g17060 | Os03g0265600 | - | Detail |
| C1H3g15389 | 3:7,752,512-7,763,079 | + | C2H3g26554 | CX3g030826 | LOC_Os03g15900 | Os03g0265700 | - | Detail |
| C1H3g08685 | 3:7,763,492-7,763,893 | + | C2H3g04049 | CX3g031044 | LOC_Os03g15910 | Os03g0265800 | - | Detail |
| C1H3g02041 | 3:7,764,185-7,765,551 | - | C2H3g14157 | CX3g030541 | LOC_Os03g15920 | Os03g0265900 | - | Detail |
| C1H3g28556 | 3:7,765,724-7,769,156 | + | C2H3g30510 | CX3g030784 | LOC_Os03g15930 | Os03g0266000 | - | Detail |
| C1H3g03702 | 3:7,771,986-7,773,906 | + | C2H3g30669 | CX3g027155 | LOC_Os03g15940 | Os03g0266100 | - | Detail |
| C1H3g31409 | 3:7,774,635-7,779,373 | - | C2H3g06090 | CX3g027025 | LOC_Os03g15950 | Os03g0266200 | - | Detail |
| C1H3g24708 | 3:7,779,907-7,780,383 | + | C2H3g29477 | CX3g028400 | LOC_Os03g16030 | Os03g0266300 | - | Detail |
| C1H3g06417 | 3:7,789,001-7,793,925 | + | C2H3g22167 | CX3g028150 | LOC_Os03g16000 | Os03g0266700 | - | Detail |
| C1H3g07398 | 3:7,796,165-7,802,033 | + | C2H3g11836 | CX3g028162 | LOC_Os03g16010 | Os03g0266800 | - | Detail |
| C1H3g16482 | 3:7,802,419-7,802,895 | - | C2H3g29477 | CX3g027459 | LOC_Os03g16030 | Os03g0267000 | OsMSR3, OsHsp18.0-CI | Detail |
| C1H3g06066 | 3:7,803,814-7,804,278 | + | C2H3g11139 | CX3g026761 | LOC_Os03g16020 | Os03g0266900 | OsHsp17.4 | Detail |
| C1H3g14734 | 3:7,807,699-7,808,172 | - | C2H3g11139 | CX3g027615 | LOC_Os03g16040 | Os03g0267200 | sHSP17.7, OSHSP17.7 | Detail |
| C1H3g06904 | 3:7,810,160-7,812,012 | - | C2H3g24515 | CX3g026398 | LOC_Os03g16050 | Os03g0267300 | - | Detail |
| C1H3g31620 | 3:7,820,863-7,823,953 | + | C2H3g00254 | CX3g030412 | LOC_Os03g16060 | Os03g0267500 | - | Detail |
| C1H3g27649 | 3:7,824,006-7,828,862 | - | C2H3g01773 | CX3g027859 | LOC_Os03g16070 | Os03g0267600 | - | Detail |
| C1H3g07562 | 3:7,836,440-7,840,919 | + | C2H3g22656 | CX3g024983 | LOC_Os03g16080 | Os03g0267700 | - | Detail |
| C1H3g17372 | 3:7,840,151-7,844,934 | - | C2H3g06739 | CX3g027806 | LOC_Os03g16090 | Os03g0267800 | HDR3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05951 | 2:28,575,920-28,584,186 | + | C1H2g30195 | CX2g023148 | LOC_Os02g50970 | Os02g0743500 | DSM1 | Detail |
| C2H2g06723 | 2:28,585,666-28,586,568 | + | C1H2g30021 | CX2g020133 | LOC_Os02g50980 | Os02g0743600 | - | Detail |
| C2H2g09821 | 2:28,597,939-28,600,115 | + | C1H2g25365 | CX2g022084 | LOC_Os02g50990 | Os02g0743700 | - | Detail |
| C2H2g07616 | 2:28,601,564-28,604,792 | - | C1H2g26688 | CX2g021744 | LOC_Os02g51000 | Os02g0743800 | - | Detail |
| C2H2g25853 | 2:28,606,085-28,606,940 | - | C1H2g19131 | CX2g020534 | LOC_Os02g51010 | Os02g0743900 | CASP4, OsCASP4 | Detail |
| C2H2g21289 | 2:28,607,773-28,608,851 | + | C1H2g30910 | CX2g022263 | LOC_Os02g51020 | Os02g0744000 | - | Detail |
| C2H2g00809 | 2:28,617,908-28,620,323 | + | C1H2g05493 | CX2g019710 | LOC_Os02g51030 | Os02g0744100 | - | Detail |
| C2H2g22842 | 2:28,629,829-28,630,897 | + | C1H2g28698 | CX2g024332 | LOC_Os02g51040 | Os02g0744200 | - | Detail |
| C2H2g01303 | 2:28,635,470-28,639,402 | - | C1H2g29538 | CX2g024594 | LOC_Os02g51060 | Os02g0744600 | OsCSLA6 | Detail |
| C2H2g07487 | 2:28,640,951-28,645,897 | - | C1H2g23191 | CX2g022323 | LOC_Os02g51070 | Os02g0744700 | OsSSII-2 | Detail |
| C2H2g08168 | 2:28,653,125-28,655,257 | + | C1H2g05032 | CX2g022360 | LOC_Os02g51080 | Os02g0744900 | LYL1, OsChl P, OsGGRI, OsGGR1 | Detail |
| C2H2g17927 | 2:28,660,430-28,663,324 | - | C1H2g28990 | CX2g022714 | LOC_Os02g51100 | Os02g0745000 | - | Detail |
| C2H2g17969 | 2:28,671,089-28,674,189 | + | C1H2g29361 | CX2g021804 | LOC_Os02g51110 | Os02g0745100 | LSI1, lsi1, NIP2-1, OsNIP2;1, NIP2;1, OsLsi1 | Detail |
| C2H2g17512 | 2:28,681,902-28,687,738 | - | C1H2g10044 | - | - | - | - | Detail |
| C2H2g06955 | 2:28,685,325-28,687,481 | + | C1H2g22873 | CX2g024809 | LOC_Os02g42970 | Os02g0745300 | - | Detail |
| C2H2g19332 | 2:28,694,298-28,696,257 | + | C1H2g26267 | CX2g024083 | LOC_Os02g51130 | Os02g0745400 | - | Detail |
| C2H2g29488 | 2:28,697,677-28,698,186 | + | C1H2g29615 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C2H2g06018 | 2:28,698,248-28,704,122 | + | C1H2g29615 | CX2g019686 | LOC_Os02g51140 | Os02g0745600 | OsNRP3 | Detail |
| C2H2g18017 | 2:28,705,109-28,707,292 | + | C1H2g00830 | CX2g024841 | LOC_Os02g51150 | Os02g0745700 | - | Detail |
| C2H2g26607 | 2:28,709,067-28,712,633 | + | C1H2g30172 | CX2g020073 | LOC_Os02g51160 | Os02g0745800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |