| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17162 | 3:7,605,121-7,605,828 | + | C2H3g04568 | CX3g029077 | LOC_Os03g15630 | Os03g0262700 | - | Detail |
| C1H3g28720 | 3:7,610,593-7,615,998 | + | C2H3g27525 | CX3g031108 | LOC_Os03g15650 | Os03g0262900 | GLUP6/GEF, OsVPS9A, VPS9a, GPA2/VPS9a, GPA2, GLUP6 | Detail |
| C1H3g05394 | 3:7,617,326-7,618,087 | - | C2H3g13896 | CX3g028305 | LOC_Os03g15660 | Os03g0263000 | - | Detail |
| C1H3g03212 | 3:7,636,151-7,637,899 | + | C2H3g08920 | CX3g027760 | LOC_Os03g15680 | Os03g0263300 | NSP2, Os NSP2, NSP2 | Detail |
| C1H3g04873 | 3:7,641,156-7,644,889 | + | C2H3g28518 | CX3g028003 | LOC_Os03g15690 | Os03g0263400 | - | Detail |
| C1H3g22836 | 3:7,645,217-7,647,921 | - | C2H3g08217 | CX3g030022 | LOC_Os03g15700 | Os03g0263500 | - | Detail |
| C1H3g14620 | 3:7,649,425-7,651,004 | - | C2H3g20978 | CX3g031268 | LOC_Os03g15710 | Os03g0263600 | OsSTRL2 | Detail |
| C1H3g20320 | 3:7,652,738-7,655,214 | + | C2H3g30231 | CX3g028260 | LOC_Os03g15720 | Os03g0263700 | - | Detail |
| C1H3g15450 | 3:7,658,188-7,660,841 | + | C2H3g12908 | CX3g027745 | LOC_Os03g15730 | Os03g0263800 | - | Detail |
| C1H3g29175 | 3:7,664,084-7,666,630 | + | C2H3g16128 | CX3g026739 | LOC_Os03g15740 | Os03g0263900 | - | Detail |
| C1H3g24070 | 3:7,668,862-7,672,660 | - | C2H3g07359 | CX3g027842 | LOC_Os03g15750 | Os03g0264000 | - | Detail |
| C1H3g19617 | 3:7,680,014-7,684,027 | + | C2H3g24590 | CX3g030764 | LOC_Os03g15770 | Os03g0264300 | - | Detail |
| C1H3g02519 | 3:7,684,563-7,689,264 | - | C2H3g11898 | CX3g029488 | LOC_Os03g15780 | Os03g0264400 | - | Detail |
| C1H3g09016 | 3:7,693,794-7,695,167 | - | C2H3g27599 | CX3g027532 | LOC_Os03g15790 | Os03g0264600 | - | Detail |
| C1H3g19306 | 3:7,698,709-7,700,154 | - | C2H3g02876 | CX3g025411 | LOC_Os03g15800 | Os03g0264700 | - | Detail |
| C1H3g00653 | 3:7,700,729-7,708,709 | - | C2H3g07031 | CX3g030279 | LOC_Os03g15810 | Os03g0264800 | - | Detail |
| C1H3g22318 | 3:7,717,463-7,720,980 | + | C2H3g21284 | CX3g026411 | LOC_Os03g15840 | Os03g0265100 | PLS2, OsSQD2.3 | Detail |
| C1H3g16209 | 3:7,721,516-7,723,744 | - | C2H3g07665 | CX3g026305 | LOC_Os03g15850 | Os03g0265200 | - | Detail |
| C1H3g16456 | 3:7,726,714-7,729,733 | + | C2H3g25611 | CX3g029962 | LOC_Os03g15860 | Os03g0265300 | - | Detail |
| C1H3g27080 | 3:7,730,423-7,732,746 | + | C2H3g15049 | CX3g031298 | LOC_Os03g15870 | Os03g0265400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g10074 | 6:882,368-884,588 | + | C1H6g26374 | CX6g044771 | LOC_Os06g03640 | Os06g0126500 | OsBAG3 | Detail |
| C2H6g16457 | 6:890,570-893,191 | + | C1H6g08039 | CX6g044567 | LOC_Os06g03660 | Os06g0127000 | PEX11-5, OsPEX11-5 | Detail |
| C2H6g24498 | 6:898,287-898,949 | + | C1H6g24795 | CX6g043830 | LOC_Os06g03670 | Os06g0127100 | OsDREB1C | Detail |
| C2H6g22226 | 6:901,330-907,859 | - | C1H6g30204 | CX6g042948 | LOC_Os06g03676 | Os06g0127200 | - | Detail |
| C2H6g14783 | 6:908,304-911,441 | - | C1H6g11151 | CX6g043338 | LOC_Os06g03682 | Os06g0127300 | - | Detail |
| C2H6g06854 | 6:915,175-919,045 | + | - | - | - | - | - | Detail |
| C2H6g25721 | 6:919,420-920,318 | + | - | - | - | - | - | Detail |
| C2H6g24069 | 6:921,289-923,778 | + | C1H6g14007 | CX6g045340 | LOC_Os06g03690 | Os06g0127500 | - | Detail |
| C2H6g20245 | 6:924,782-927,881 | - | C1H6g10479 | - | - | - | - | Detail |
| C2H6g30624 | 6:928,559-933,136 | + | C1H6g17810 | CX6g041519 | LOC_Os06g03700 | Os06g0127700 | - | Detail |
| C2H6g08491 | 6:936,389-938,242 | - | - | CX6g045799 | LOC_Os06g03710 | Os06g0127800 | DLT, dlt, OsGRAS32, OsDLT | Detail |
| C2H6g12082 | 6:941,325-942,461 | + | - | CX6g041393 | LOC_Os06g03720 | Os06g0127900 | RNRS2 | Detail |
| C2H6g28052 | 6:943,879-946,853 | - | C1H2g01179 | - | - | - | - | Detail |
| C2H6g18696 | 6:947,730-948,691 | + | C1H6g24899 | CX6g045479 | LOC_Os06g03740 | Os06g0128000 | - | Detail |
| C2H6g15477 | 6:950,325-955,142 | + | C1H6g20127 | CX6g044568 | LOC_Os06g03750 | Os06g0128100 | - | Detail |
| C2H6g13317 | 6:955,898-960,375 | - | C1H6g31210 | CX6g041448 | LOC_Os06g03760 | Os06g0128200 | - | Detail |
| C2H6g29378 | 6:964,078-972,923 | - | C1H6g28537 | CX6g043010 | LOC_Os06g03770 | Os06g0128300 | - | Detail |
| C2H6g10322 | 6:974,718-982,113 | + | C1H6g12756 | CX6g042444 | LOC_Os06g03780 | Os06g0128400 | - | Detail |
| C2H6g19956 | 6:982,947-983,348 | + | C1H6g04394 | - | LOC_Os06g03790 | Os06g0128500 | - | Detail |
| C2H6g09883 | 6:984,734-986,073 | + | C1H6g04394 | - | LOC_Os06g03790 | Os06g0128500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |