| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g18791 | 3:7,288,996-7,295,302 | - | C2H3g22717 | CX3g028831 | LOC_Os03g15020 | Os03g0255100 | - | Detail |
| C1H3g09921 | 3:7,301,234-7,304,501 | - | C2H3g05629 | CX3g025198 | LOC_Os03g15033 | Os03g0255200 | - | Detail |
| C1H3g18545 | 3:7,305,520-7,311,108 | + | C2H3g25452 | CX3g026675 | LOC_Os03g15040 | Os03g0255400 | - | Detail |
| C1H3g28815 | 3:7,312,644-7,318,188 | - | C2H3g13946 | CX3g027919 | LOC_Os03g15050 | Os03g0255500 | - | Detail |
| C1H3g15643 | 3:7,331,169-7,332,085 | - | C2H3g02274 | CX3g026544 | - | Os03g0255900 | - | Detail |
| C1H3g10127 | 3:7,341,430-7,346,475 | - | C2H3g16394 | CX3g029004 | LOC_Os03g15120 | Os03g0256400 | - | Detail |
| C1H3g29561 | 3:7,348,624-7,358,490 | - | C2H3g29398 | CX3g027278 | LOC_Os03g11140 | Os03g0256800 | - | Detail |
| C1H3g02917 | 3:7,361,242-7,364,246 | - | C2H3g13682 | CX3g030888 | LOC_Os03g15190 | Os03g0257000 | - | Detail |
| C1H3g17145 | 3:7,370,694-7,371,562 | - | C2H3g28753 | CX3g026307 | LOC_Os03g15210 | Os03g0257500 | - | Detail |
| C1H3g20346 | 3:7,378,376-7,379,241 | - | C2H3g29554 | CX3g026307 | LOC_Os03g15220 | Os03g0257500 | - | Detail |
| C1H3g29683 | 3:7,380,993-7,384,082 | - | C2H3g21076 | CX3g026307 | - | Os09g0310800 | - | Detail |
| C1H3g04833 | 3:7,384,525-7,387,172 | - | C2H3g13156 | CX3g026307 | LOC_Os03g15230 | Os03g0257600 | - | Detail |
| C1H3g17923 | 3:7,391,359-7,393,233 | + | C2H3g04251 | CX3g028163 | LOC_Os03g15240 | Os03g0257900 | - | Detail |
| C1H3g28844 | 3:7,393,689-7,398,404 | - | C2H3g19447 | CX3g030006 | LOC_Os03g15250 | Os03g0258000 | - | Detail |
| C1H3g11521 | 3:7,405,168-7,406,271 | + | C2H3g22413 | CX3g031275 | LOC_Os03g15270 | Os03g0258200 | - | Detail |
| C1H3g20981 | 3:7,406,319-7,406,549 | - | C2H3g12196 | - | - | - | - | Detail |
| C1H3g24652 | 3:7,413,457-7,418,608 | + | C2H3g23907 | CX3g026336 | LOC_Os03g15290 | Os03g0258500 | ATG6C, OsATG6c, OsATG6b | Detail |
| C1H3g15329 | 3:7,424,554-7,426,245 | + | C2H3g03473 | CX3g028133 | LOC_Os03g15320 | Os03g0258900 | - | Detail |
| C1H3g13462 | 3:7,430,146-7,431,298 | - | C2H3g10429 | CX3g028092 | - | - | - | Detail |
| C1H3g03982 | 3:7,439,478-7,439,949 | + | C2H3g20701 | CX3g029872 | LOC_Os03g15340 | Os03g0259100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g11548 | 5:89,472-92,258 | - | C1H5g01547 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C2H5g11343 | 5:111,661-115,338 | + | C1H5g21429 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C2H5g29002 | 5:116,358-117,137 | + | C1H5g12210 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C2H5g25831 | 5:117,757-119,874 | - | C1H5g24021 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C2H5g09707 | 5:123,135-128,032 | + | C1H5g11428 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C2H5g01721 | 5:128,550-136,424 | - | C1H5g05413 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C2H5g05131 | 5:146,140-149,050 | + | C1H5g16359 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C2H5g28008 | 5:151,155-153,242 | - | C1H5g27377 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C2H5g14971 | 5:154,136-156,516 | - | C1H5g28308 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C2H5g18349 | 5:157,553-160,041 | + | C1H5g30548 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C2H5g25073 | 5:175,365-179,199 | - | C1H5g25959 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C2H5g19367 | 5:180,002-183,211 | - | C1H5g00386 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C2H5g05200 | 5:185,538-186,995 | - | C1H5g16700 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C2H5g18611 | 5:190,252-194,396 | + | C1H5g29606 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C2H5g24643 | 5:195,669-203,082 | + | C1H5g00400 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C2H5g21529 | 5:203,756-204,790 | + | C1H5g15746 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C2H5g16478 | 5:206,603-207,532 | + | C1H5g23583 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C2H5g22812 | 5:208,014-209,042 | + | C1H5g17625 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C2H5g01578 | 5:210,816-215,948 | + | C1H5g17368 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C2H5g13110 | 5:219,269-221,405 | - | C1H5g26046 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |