| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g18791 | 3:7,288,996-7,295,302 | - | C2H3g22717 | CX3g028831 | LOC_Os03g15020 | Os03g0255100 | - | Detail |
| C1H3g09921 | 3:7,301,234-7,304,501 | - | C2H3g05629 | CX3g025198 | LOC_Os03g15033 | Os03g0255200 | - | Detail |
| C1H3g18545 | 3:7,305,520-7,311,108 | + | C2H3g25452 | CX3g026675 | LOC_Os03g15040 | Os03g0255400 | - | Detail |
| C1H3g28815 | 3:7,312,644-7,318,188 | - | C2H3g13946 | CX3g027919 | LOC_Os03g15050 | Os03g0255500 | - | Detail |
| C1H3g15643 | 3:7,331,169-7,332,085 | - | C2H3g02274 | CX3g026544 | - | Os03g0255900 | - | Detail |
| C1H3g10127 | 3:7,341,430-7,346,475 | - | C2H3g16394 | CX3g029004 | LOC_Os03g15120 | Os03g0256400 | - | Detail |
| C1H3g29561 | 3:7,348,624-7,358,490 | - | C2H3g29398 | CX3g027278 | LOC_Os03g11140 | Os03g0256800 | - | Detail |
| C1H3g02917 | 3:7,361,242-7,364,246 | - | C2H3g13682 | CX3g030888 | LOC_Os03g15190 | Os03g0257000 | - | Detail |
| C1H3g17145 | 3:7,370,694-7,371,562 | - | C2H3g28753 | CX3g026307 | LOC_Os03g15210 | Os03g0257500 | - | Detail |
| C1H3g20346 | 3:7,378,376-7,379,241 | - | C2H3g29554 | CX3g026307 | LOC_Os03g15220 | Os03g0257500 | - | Detail |
| C1H3g29683 | 3:7,380,993-7,384,082 | - | C2H3g21076 | CX3g026307 | - | Os09g0310800 | - | Detail |
| C1H3g04833 | 3:7,384,525-7,387,172 | - | C2H3g13156 | CX3g026307 | LOC_Os03g15230 | Os03g0257600 | - | Detail |
| C1H3g17923 | 3:7,391,359-7,393,233 | + | C2H3g04251 | CX3g028163 | LOC_Os03g15240 | Os03g0257900 | - | Detail |
| C1H3g28844 | 3:7,393,689-7,398,404 | - | C2H3g19447 | CX3g030006 | LOC_Os03g15250 | Os03g0258000 | - | Detail |
| C1H3g11521 | 3:7,405,168-7,406,271 | + | C2H3g22413 | CX3g031275 | LOC_Os03g15270 | Os03g0258200 | - | Detail |
| C1H3g20981 | 3:7,406,319-7,406,549 | - | C2H3g12196 | - | - | - | - | Detail |
| C1H3g24652 | 3:7,413,457-7,418,608 | + | C2H3g23907 | CX3g026336 | LOC_Os03g15290 | Os03g0258500 | ATG6C, OsATG6c, OsATG6b | Detail |
| C1H3g15329 | 3:7,424,554-7,426,245 | + | C2H3g03473 | CX3g028133 | LOC_Os03g15320 | Os03g0258900 | - | Detail |
| C1H3g13462 | 3:7,430,146-7,431,298 | - | C2H3g10429 | CX3g028092 | - | - | - | Detail |
| C1H3g03982 | 3:7,439,478-7,439,949 | + | C2H3g20701 | CX3g029872 | LOC_Os03g15340 | Os03g0259100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g01792 | 12:1,503,350-1,505,550 | - | C1H12g01014 | CX11g013375 | LOC_Os12g03880 | Os12g0133050 | OsP0C | Detail |
| C2H12g17288 | 12:1,508,239-1,515,716 | - | C1H12g17796 | - | LOC_Os12g03899 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| C2H12g04645 | 12:1,519,049-1,519,559 | - | C1H12g07094 | - | LOC_Os11g04104 | Os12g0133100 | OsVMT, OsZIFL12, OsVMT/OsZIFL12 | Detail |
| C2H12g04214 | 12:1,525,685-1,525,957 | + | C1H12g02841 | CX12g018506 | LOC_Os12g03920 | Os12g0518200 | OsDUF6 | Detail |
| C2H12g02838 | 12:1,528,205-1,529,855 | + | C1H12g21650 | CX12g018506 | LOC_Os12g03920 | Os12g0518200 | OsDUF6 | Detail |
| C2H12g26253 | 12:1,533,283-1,541,952 | - | C1H12g00189 | - | LOC_Os11g04150 | Os12g0133300 | - | Detail |
| C2H12g30444 | 12:1,544,701-1,546,057 | + | C1H12g27817 | CX12g015267 | LOC_Os12g03960 | Os12g0133400 | - | Detail |
| C2H12g10222 | 12:1,546,731-1,548,867 | + | C1H12g15237 | CX12g018659 | LOC_Os12g03970 | Os12g0133500 | OsCPK26 | Detail |
| C2H12g11861 | 12:1,550,525-1,550,722 | - | C1H12g29110 | CX12g015288 | LOC_Os12g03980 | Os12g0133600 | - | Detail |
| C2H12g22177 | 12:1,551,626-1,553,781 | - | C1H12g04680 | CX12g017140 | LOC_Os12g03990 | Os12g0133700 | - | Detail |
| C2H12g11358 | 12:1,557,484-1,560,607 | - | C1H12g21432 | CX12g018350 | LOC_Os12g04000 | Os12g0133800 | OsPIN1d | Detail |
| C2H12g09127 | 12:1,565,767-1,570,389 | - | C1H12g29892 | CX12g018288 | LOC_Os12g04010 | Os12g0133900 | - | Detail |
| C2H12g28374 | 12:1,572,996-1,576,527 | + | C1H12g11846 | CX12g015977 | LOC_Os12g04020 | Os12g0134000 | - | Detail |
| C2H12g25164 | 12:1,576,902-1,592,759 | - | C1H12g20440 | CX12g015093 | LOC_Os12g04030 | Os12g0134200 | - | Detail |
| C2H12g04115 | 12:1,593,008-1,600,168 | + | C1H12g28477 | CX12g016579 | LOC_Os12g04060 | Os12g0134300 | - | Detail |
| C2H12g17966 | 12:1,600,938-1,601,438 | - | C1H12g06754 | CX12g018121 | LOC_Os12g04090 | Os12g0134500 | - | Detail |
| C2H12g01480 | 12:1,601,758-1,603,107 | - | C1H12g27630 | CX12g016834 | LOC_Os12g04080 | Os12g0134700 | - | Detail |
| C2H12g04217 | 12:1,607,335-1,611,027 | - | C1H12g09535 | CX12g018605 | LOC_Os12g04110 | Os12g0135000 | - | Detail |
| C2H12g24794 | 12:1,611,256-1,614,850 | - | C1H12g28951 | CX12g018811 | LOC_Os12g04110 | Os12g0135051 | - | Detail |
| C2H12g14583 | 12:1,617,138-1,618,065 | - | C1H12g20775 | CX12g018811 | LOC_Os12g04120 | Os12g0135100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |