| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24923 | 1:13,798,897-13,806,357 | - | C2H1g04184 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C1H1g25289 | 1:13,822,069-13,822,308 | + | C2H1g05311 | - | LOC_Os01g27070 | Os01g0368500 | - | Detail |
| C1H1g29900 | 1:13,822,688-13,824,024 | + | C2H1g05311 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C1H1g21071 | 1:13,844,768-13,853,413 | - | C2H1g23898 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| C1H1g21722 | 1:13,861,346-13,866,738 | + | C2H1g08610 | CX1g007040 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| C1H1g09984 | 1:13,867,263-13,867,565 | - | C2H1g00961 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C1H1g16578 | 1:13,867,587-13,871,948 | - | C2H1g00961 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C1H1g21027 | 1:13,875,291-13,876,304 | + | C2H1g23105 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C1H1g15878 | 1:13,876,388-13,877,154 | + | C2H1g15692 | - | - | - | - | Detail |
| C1H1g28118 | 1:13,880,041-13,880,500 | + | C2H1g16294 | CX1g005028 | - | - | - | Detail |
| C1H1g15388 | 1:13,884,773-13,886,360 | - | C2H1g16460 | CX1g002058 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C1H1g02110 | 1:13,897,917-13,898,813 | + | C2H1g23105 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C1H1g03904 | 1:13,904,189-13,905,750 | - | C2H1g16460 | CX1g005613 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C1H1g06071 | 1:13,917,711-13,919,649 | - | C2H1g30124 | CX1g000151 | LOC_Os01g27230 | Os01g0370000 | - | Detail |
| C1H1g23256 | 1:13,920,819-13,921,385 | - | C2H1g30124 | CX1g005680 | LOC_Os01g27240 | Os01g0369900 | - | Detail |
| C1H1g03681 | 1:13,926,362-13,928,647 | - | C2H1g01507 | CX1g005680 | LOC_Os01g27240 | Os01g0370000 | - | Detail |
| C1H1g30782 | 1:13,947,447-13,948,595 | - | C2H1g22665 | CX1g001786 | LOC_Os01g27260 | Os01g0370200 | - | Detail |
| C1H1g22563 | 1:13,953,832-13,955,238 | + | C2H1g23519 | CX1g004528 | LOC_Os01g27300 | Os01g0370600 | - | Detail |
| C1H1g15771 | 1:13,968,971-13,970,431 | - | - | - | - | - | - | Detail |
| C1H1g11191 | 1:13,971,806-13,974,151 | - | C2H1g23519 | CX1g000438 | LOC_Os01g27360 | Os01g0371200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g19572 | 11:19,834,529-19,837,675 | + | C1H11g13440 | CX11g014691 | LOC_Os11g37870 | Os11g0590900 | - | Detail |
| C2H11g11950 | 11:19,840,861-19,847,843 | + | C1H11g14040 | CX11g014691 | LOC_Os11g37880 | Os11g0591000 | - | Detail |
| C2H11g23599 | 11:19,849,564-19,854,276 | - | C1H11g09457 | CX11g011285 | LOC_Os11g37890 | Os11g0591100 | OsGME2 | Detail |
| C2H11g11497 | 11:19,856,593-19,859,923 | - | C1H11g00286 | CX11g013352 | LOC_Os11g37900 | Os11g0591200 | - | Detail |
| C2H11g09748 | 11:19,876,536-19,877,809 | + | C1H11g09885 | CX11g011641 | LOC_Os11g37920 | Os11g0591550 | - | Detail |
| C2H11g13995 | 11:19,883,589-19,884,101 | + | C1H11g04012 | - | LOC_Os11g37970 | Os11g0591700 | OsPR4e | Detail |
| C2H11g19963 | 11:19,886,837-19,887,787 | + | C1H11g08666 | - | LOC_Os11g37940 | Os11g0591800 | OsPR4d | Detail |
| C2H11g11345 | 11:19,889,716-19,890,346 | + | C1H11g07617 | - | LOC_Os11g37950 | Os11g0592000 | OsPR4c | Detail |
| C2H11g10110 | 11:19,893,516-19,894,668 | + | C1H11g17821 | - | LOC_Os11g37960 | Os11g0592100 | OsPR4b, OsPR-4b | Detail |
| C2H11g00472 | 11:19,897,691-19,898,574 | + | C1H11g27359 | - | LOC_Os11g37970 | Os11g0592200 | OsPR4a, OsPR4 | Detail |
| C2H11g28823 | 11:19,900,666-19,903,994 | - | C1H11g10927 | CX11g011145 | LOC_Os11g37980 | Os11g0592300 | - | Detail |
| C2H11g28741 | 11:19,904,115-19,904,348 | - | C1H11g10256 | - | LOC_Os11g37980 | - | - | Detail |
| C2H11g30302 | 11:19,908,652-19,914,696 | - | C1H11g12114 | CX11g011568 | LOC_Os11g37990 | Os11g0592400 | OsCFM3 | Detail |
| C2H11g04172 | 11:19,915,775-19,924,373 | + | C1H11g00351 | CX11g013487 | LOC_Os11g38000 | Os11g0592500 | - | Detail |
| C2H11g11205 | 11:19,929,216-19,929,740 | + | C1H11g17785 | CX11g014945 | - | - | - | Detail |
| C2H11g20898 | 11:19,935,743-19,939,441 | + | C1H11g13401 | CX11g014721 | LOC_Os11g38010 | Os11g0592600 | - | Detail |
| C2H11g02481 | 11:19,940,169-19,945,195 | + | C1H11g06247 | CX11g011495 | LOC_Os11g38020 | Os11g0592700 | - | Detail |
| C2H11g13340 | 11:19,945,666-19,949,478 | - | C1H11g09697 | CX11g014064 | LOC_Os11g38030 | Os11g0592800 | - | Detail |
| C2H11g27401 | 11:19,950,371-19,952,207 | - | C1H11g22955 | CX11g011167 | LOC_Os11g38040 | Os11g0592900 | - | Detail |
| C2H11g20216 | 11:19,958,265-19,962,850 | - | C1H11g03477 | CX11g011244 | LOC_Os11g38050 | Os11g0593000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |