| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g24923 | 1:13,798,897-13,806,357 | - | C2H1g04184 | CX1g006855 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| C1H1g25289 | 1:13,822,069-13,822,308 | + | C2H1g05311 | - | LOC_Os01g27070 | Os01g0368500 | - | Detail |
| C1H1g29900 | 1:13,822,688-13,824,024 | + | C2H1g05311 | CX1g000728 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| C1H1g21071 | 1:13,844,768-13,853,413 | - | C2H1g23898 | CX1g002302 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| C1H1g21722 | 1:13,861,346-13,866,738 | + | C2H1g08610 | CX1g007040 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| C1H1g09984 | 1:13,867,263-13,867,565 | - | C2H1g00961 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C1H1g16578 | 1:13,867,587-13,871,948 | - | C2H1g00961 | CX1g002985 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| C1H1g21027 | 1:13,875,291-13,876,304 | + | C2H1g23105 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C1H1g15878 | 1:13,876,388-13,877,154 | + | C2H1g15692 | - | - | - | - | Detail |
| C1H1g28118 | 1:13,880,041-13,880,500 | + | C2H1g16294 | CX1g005028 | - | - | - | Detail |
| C1H1g15388 | 1:13,884,773-13,886,360 | - | C2H1g16460 | CX1g002058 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C1H1g02110 | 1:13,897,917-13,898,813 | + | C2H1g23105 | CX1g004644 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| C1H1g03904 | 1:13,904,189-13,905,750 | - | C2H1g16460 | CX1g005613 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| C1H1g06071 | 1:13,917,711-13,919,649 | - | C2H1g30124 | CX1g000151 | LOC_Os01g27230 | Os01g0370000 | - | Detail |
| C1H1g23256 | 1:13,920,819-13,921,385 | - | C2H1g30124 | CX1g005680 | LOC_Os01g27240 | Os01g0369900 | - | Detail |
| C1H1g03681 | 1:13,926,362-13,928,647 | - | C2H1g01507 | CX1g005680 | LOC_Os01g27240 | Os01g0370000 | - | Detail |
| C1H1g30782 | 1:13,947,447-13,948,595 | - | C2H1g22665 | CX1g001786 | LOC_Os01g27260 | Os01g0370200 | - | Detail |
| C1H1g22563 | 1:13,953,832-13,955,238 | + | C2H1g23519 | CX1g004528 | LOC_Os01g27300 | Os01g0370600 | - | Detail |
| C1H1g15771 | 1:13,968,971-13,970,431 | - | - | - | - | - | - | Detail |
| C1H1g11191 | 1:13,971,806-13,974,151 | - | C2H1g23519 | CX1g000438 | LOC_Os01g27360 | Os01g0371200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g13009 | 6:6,336,370-6,338,406 | - | C1H6g20998 | CX6g042642 | LOC_Os06g13550 | Os06g0243801 | - | Detail |
| C2H6g28019 | 6:6,341,740-6,350,486 | + | C1H6g11867 | CX6g043857 | LOC_Os06g13570 | Os06g0244100 | - | Detail |
| C2H6g18366 | 6:6,351,663-6,353,950 | - | C1H6g10383 | CX6g045537 | LOC_Os06g13580 | Os06g0244200 | - | Detail |
| C2H6g02596 | 6:6,380,764-6,383,872 | + | C1H6g23945 | CX6g041648 | LOC_Os06g13600 | Os06g0244700 | - | Detail |
| C2H6g25652 | 6:6,390,580-6,390,978 | - | - | - | - | - | - | Detail |
| C2H6g21184 | 6:6,395,506-6,395,823 | - | C1H6g17530 | CX6g045939 | LOC_Os06g03920 | Os06g0129800 | - | Detail |
| C2H6g11999 | 6:6,410,401-6,413,370 | - | C1H6g10314 | CX6g044227 | LOC_Os06g13640 | Os06g0245600 | RPL1 | Detail |
| C2H6g09807 | 6:6,420,111-6,425,597 | - | C1H6g17705 | CX6g043584 | LOC_Os06g13650 | Os06g0245700 | - | Detail |
| C2H6g10274 | 6:6,431,235-6,437,904 | + | C1H6g09414 | CX6g044406 | LOC_Os06g13660 | Os06g0245800 | - | Detail |
| C2H6g18288 | 6:6,441,185-6,443,851 | + | C1H6g19389 | CX2g021394 | LOC_Os06g13670 | Os06g0245900 | OsE2Fe-2 | Detail |
| C2H6g09103 | 6:6,446,047-6,447,391 | - | C1H6g02337 | CX6g044603 | LOC_Os06g13680 | Os06g0246000 | - | Detail |
| C2H6g11249 | 6:6,453,114-6,455,829 | + | C1H6g08415 | CX2g023255 | LOC_Os06g13720 | Os06g0246500 | - | Detail |
| C2H6g04748 | 6:6,471,711-6,472,832 | + | - | CX6g042552 | LOC_Os06g13760 | Os06g0247000 | - | Detail |
| C2H6g22170 | 6:6,485,232-6,490,641 | - | C1H6g07218 | CX6g042091 | LOC_Os06g13810 | Os06g0247500 | - | Detail |
| C2H6g07966 | 6:6,498,036-6,506,921 | + | C1H6g30049 | CX6g044254 | LOC_Os06g13820 | Os06g0247800 | - | Detail |
| C2H6g05734 | 6:6,507,409-6,510,911 | - | C1H6g19090 | CX6g043631 | LOC_Os06g13830 | Os06g0247900 | - | Detail |
| C2H6g12235 | 6:6,539,931-6,540,533 | + | C1H6g00473 | CX6g044796 | LOC_Os06g13839 | Os06g0248200 | - | Detail |
| C2H6g06570 | 6:6,541,216-6,542,797 | - | C1H6g08977 | CX6g045645 | LOC_Os06g13850 | Os06g0250000 | - | Detail |
| C2H6g15689 | 6:6,544,566-6,549,924 | + | C1H6g16301 | CX6g042062 | LOC_Os06g13860 | Os06g0248400 | - | Detail |
| C2H6g04443 | 6:6,555,129-6,556,478 | + | C1H6g15545 | CX6g041945 | LOC_Os06g13870 | Os06g0248500 | OsPUB39 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |