| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g22396 | 3:7,108,898-7,109,449 | - | C2H3g07197 | CX3g030425 | - | - | - | Detail |
| C1H3g11496 | 3:7,113,752-7,114,810 | - | C2H3g07863 | CX3g028408 | LOC_Os03g14730 | Os03g0252100 | DIP12, OsDIP12 | Detail |
| C1H3g20834 | 3:7,144,714-7,145,296 | + | C2H3g09632 | CX3g025353 | LOC_Os03g14790 | - | - | Detail |
| C1H3g27328 | 3:7,145,872-7,149,486 | + | C2H3g26671 | CX3g025353 | LOC_Os03g14790 | Os03g0682200 | - | Detail |
| C1H3g10342 | 3:7,151,431-7,156,722 | - | C2H3g27873 | CX3g029321 | LOC_Os03g14800 | Os03g0252800 | - | Detail |
| C1H3g03427 | 3:7,161,182-7,161,757 | - | C2H3g05415 | CX3g026810 | LOC_Os03g14810 | Os03g0252900 | - | Detail |
| C1H3g13989 | 3:7,167,783-7,173,515 | - | C2H3g20389 | CX3g025241 | - | Os03g0253100 | - | Detail |
| C1H3g21796 | 3:7,182,060-7,183,592 | + | C2H3g29944 | CX3g029104 | LOC_Os03g14840 | Os03g0253200 | - | Detail |
| C1H3g30447 | 3:7,197,443-7,198,741 | - | C2H3g07742 | CX3g029003 | LOC_Os03g14860 | Os03g0253500 | - | Detail |
| C1H3g10348 | 3:7,202,134-7,203,147 | - | C2H3g06446 | CX3g028867 | LOC_Os03g14880 | Os03g0253600 | - | Detail |
| C1H3g02049 | 3:7,218,395-7,223,525 | - | C2H3g06821 | - | LOC_Os03g14890 | Os03g0253800 | - | Detail |
| C1H3g17610 | 3:7,225,568-7,229,374 | - | C2H3g12053 | CX3g029243 | LOC_Os03g14900 | Os03g0254000 | - | Detail |
| C1H3g15353 | 3:7,232,363-7,234,224 | + | C2H3g19284 | CX3g028413 | LOC_Os03g14910 | Os03g0254200 | - | Detail |
| C1H3g13729 | 3:7,235,215-7,235,989 | + | C2H3g17074 | CX3g025235 | LOC_Os03g14915 | - | - | Detail |
| C1H3g15012 | 3:7,246,382-7,248,584 | + | C2H3g07624 | CX3g027887 | LOC_Os03g14950 | Os03g0254400 | - | Detail |
| C1H3g14658 | 3:7,253,101-7,253,379 | - | C2H3g23799 | CX3g029818 | - | - | - | Detail |
| C1H3g26948 | 3:7,257,504-7,267,353 | - | C2H3g04070 | - | - | - | - | Detail |
| C1H3g12429 | 3:7,269,834-7,273,697 | - | C2H3g05698 | CX3g030250 | LOC_Os03g14990 | Os03g0254800 | - | Detail |
| C1H3g29260 | 3:7,274,188-7,278,418 | - | C2H3g27981 | CX3g028925 | LOC_Os03g15000 | Os03g0254900 | - | Detail |
| C1H3g29943 | 3:7,284,805-7,287,831 | + | C2H3g19768 | CX3g027619 | LOC_Os03g15010 | Os03g0255000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g04004 | 8:5,771,062-5,771,365 | - | C1H8g03209 | CX8g054269 | - | Os08g0270400 | - | Detail |
| C2H8g22554 | 8:5,784,474-5,789,628 | - | C1H8g28924 | - | - | - | - | Detail |
| C2H8g11288 | 8:5,804,981-5,814,122 | + | C1H8g01505 | CX8g051947 | LOC_Os08g12430 | Os08g0220600 | - | Detail |
| C2H8g09370 | 8:5,831,517-5,833,737 | + | C1H8g13070 | CX8g051797 | LOC_Os08g12410 | Os08g0220400 | - | Detail |
| C2H8g02973 | 8:5,840,532-5,844,550 | + | C1H8g19765 | CX8g053900 | - | - | - | Detail |
| C2H8g29558 | 8:5,883,757-5,885,228 | + | C1H8g16716 | CX8g050444 | LOC_Os08g12600 | Os08g0218700 | - | Detail |
| C2H8g01952 | 8:5,930,056-5,930,709 | + | C1H8g16716 | CX8g050856 | LOC_Os08g12600 | Os08g0222800 | - | Detail |
| C2H8g20546 | 8:5,963,627-5,985,561 | + | C1H8g03352 | CX8g051187 | LOC_Os08g12680 | Os08g0223700 | - | Detail |
| C2H8g25187 | 8:6,052,965-6,060,722 | + | C1H8g14253 | CX8g052647 | - | Os08g0223900 | OsOSC12/OsPTS1, OsOSC12, OsPTS1 | Detail |
| C2H8g14764 | 8:6,060,855-6,064,095 | - | C1H8g11911 | CX8g054084 | LOC_Os08g12740 | Os08g0224000 | - | Detail |
| C2H8g05725 | 8:6,066,531-6,071,471 | + | C1H8g03535 | CX8g053386 | LOC_Os08g12750 | Os08g0224100 | - | Detail |
| C2H8g25932 | 8:6,071,887-6,075,956 | - | C1H8g09432 | CX8g050738 | LOC_Os08g12760 | Os08g0224200 | - | Detail |
| C2H8g14168 | 8:6,081,880-6,087,320 | - | C1H8g13554 | CX8g052190 | LOC_Os08g12780 | Os08g0224300 | ARE1, OsARE1 | Detail |
| C2H8g26697 | 8:6,093,385-6,098,186 | + | C1H8g13808 | CX8g054167 | LOC_Os08g12800 | Os08g0224500 | - | Detail |
| C2H8g13128 | 8:6,101,615-6,102,448 | + | - | CX8g051380 | - | - | - | Detail |
| C2H8g28213 | 8:6,103,110-6,108,714 | + | C1H8g18116 | CX8g052940 | LOC_Os08g12820 | Os08g0224700 | - | Detail |
| C2H8g29095 | 8:6,114,031-6,118,682 | + | C1H8g20149 | CX8g053707 | LOC_Os08g12830 | Os08g0224800 | - | Detail |
| C2H8g07408 | 8:6,121,063-6,123,225 | - | C1H8g10159 | CX8g050839 | LOC_Os08g12840 | Os08g0225000 | ZL16, OsHAD1 | Detail |
| C2H8g19330 | 8:6,123,765-6,124,523 | - | C1H8g01816 | CX8g053397 | - | - | - | Detail |
| C2H8g04092 | 8:6,127,213-6,131,606 | - | C1H8g25010 | CX8g052773 | LOC_Os08g12850 | Os08g0225100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |