| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g21569 | 3:6,970,786-6,972,487 | + | C2H3g26557 | CX3g029611 | LOC_Os03g14500 | Os03g0249100 | - | Detail |
| C1H3g23105 | 3:6,972,856-6,975,780 | + | C2H3g29515 | CX3g029820 | LOC_Os03g14510 | Os03g0249200 | - | Detail |
| C1H3g11399 | 3:6,979,679-6,982,658 | + | C2H3g01671 | CX3g027233 | LOC_Os03g14520 | Os03g0249300 | - | Detail |
| C1H3g07919 | 3:6,983,345-6,984,998 | + | C2H3g21948 | CX3g027067 | LOC_Os03g14530 | Os03g0249400 | - | Detail |
| C1H3g04860 | 3:6,987,775-6,989,229 | + | C2H3g26153 | CX3g026238 | LOC_Os03g14540 | Os03g0249500 | - | Detail |
| C1H3g27147 | 3:6,993,242-6,993,880 | + | C2H3g22650 | CX3g026981 | LOC_Os03g14550 | Os03g0760800 | GASR1, OsGASR1 | Detail |
| C1H3g11524 | 3:7,006,819-7,007,211 | - | C2H3g02802 | CX3g027321 | LOC_Os03g14570 | Os03g0249700 | - | Detail |
| C1H3g00105 | 3:7,011,187-7,013,601 | + | C2H3g12837 | CX3g026249 | LOC_Os03g14580 | Os03g0249900 | - | Detail |
| C1H3g21182 | 3:7,014,151-7,017,287 | - | C2H3g11625 | CX3g029360 | LOC_Os03g14590 | Os03g0250000 | - | Detail |
| C1H3g01522 | 3:7,019,726-7,024,773 | - | C2H3g05440 | CX3g030683 | LOC_Os03g14610 | Os03g0250200 | - | Detail |
| C1H3g02022 | 3:7,028,607-7,029,587 | - | C2H3g10452 | - | LOC_Os03g14615 | Os03g0250301 | - | Detail |
| C1H3g21317 | 3:7,037,267-7,037,656 | - | C2H3g28271 | CX3g028936 | LOC_Os03g14630 | Os03g0250400 | - | Detail |
| C1H3g06987 | 3:7,058,647-7,060,901 | - | C2H3g21148 | - | - | - | - | Detail |
| C1H3g07575 | 3:7,061,460-7,062,817 | - | C2H3g21148 | - | - | - | - | Detail |
| C1H3g24661 | 3:7,070,652-7,071,134 | - | - | - | LOC_Os03g14642 | Os03g0251000 | - | Detail |
| C1H3g21746 | 3:7,078,492-7,079,232 | - | C2H3g12224 | CX3g025713 | LOC_Os03g14669 | Os03g0251350 | OsHAP5C, OsNF-YC2 | Detail |
| C1H3g08441 | 3:7,083,335-7,092,190 | + | C2H3g01417 | CX3g029617 | LOC_Os03g14690 | Os03g0251500 | - | Detail |
| C1H3g08518 | 3:7,092,515-7,095,645 | - | C2H3g22211 | CX3g027601 | LOC_Os03g14700 | Os03g0251600 | OsC2DP29 | Detail |
| C1H3g13884 | 3:7,099,610-7,103,713 | + | C2H3g23862 | CX3g025283 | LOC_Os03g14710 | Os03g0251700 | - | Detail |
| C1H3g19434 | 3:7,104,641-7,108,221 | - | C2H3g08409 | CX3g029065 | LOC_Os03g14720 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g06508 | 6:614,608-617,757 | + | C1H6g05893 | CX6g042923 | LOC_Os06g02520 | Os06g0115600 | IPD3, OsIPD3, Osipd3, CYCLOPS, IPD3/CYCLOPS, OsCYCLOPS | Detail |
| C2H6g04821 | 6:618,382-619,101 | - | C1H6g13072 | CX6g044608 | LOC_Os06g02530 | Os06g0115700 | - | Detail |
| C2H6g10122 | 6:619,763-623,981 | - | C1H6g29518 | CX6g042491 | LOC_Os06g02540 | Os06g0115800 | - | Detail |
| C2H6g10225 | 6:627,400-634,336 | + | C1H6g10274 | CX6g045903 | LOC_Os06g02550 | Os06g0154500 | MAPK6, OsMAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, DSG1 | Detail |
| C2H6g13300 | 6:635,245-637,761 | - | C1H6g15739 | CX6g044989 | LOC_Os06g02560 | Os06g0116200 | OsGRF5 | Detail |
| C2H6g03741 | 6:644,381-648,451 | - | C1H6g24770 | CX6g041960 | LOC_Os06g02570 | Os06g0116300 | - | Detail |
| C2H6g03499 | 6:649,971-651,672 | - | C1H6g02215 | CX6g042572 | LOC_Os06g02580 | Os06g0116400 | - | Detail |
| C2H6g25856 | 6:657,017-665,315 | + | C1H6g17710 | CX6g044871 | LOC_Os06g02590 | Os06g0116500 | - | Detail |
| C2H6g29867 | 6:665,813-669,040 | + | C1H6g09591 | CX6g042668 | LOC_Os06g02600 | Os06g0116600 | - | Detail |
| C2H6g06579 | 6:669,187-670,193 | - | C1H6g24899 | CX6g042636 | LOC_Os06g02610 | Os06g0128000 | - | Detail |
| C2H6g00033 | 6:670,701-676,072 | - | C1H6g20657 | CX6g042612 | LOC_Os06g02620 | Os06g0116800 | - | Detail |
| C2H6g02806 | 6:676,852-677,580 | - | - | CX6g041324 | LOC_Os06g02630 | Os06g0116900 | - | Detail |
| C2H6g15208 | 6:680,690-683,631 | - | - | CX6g044367 | LOC_Os06g02640 | Os06g0116933 | - | Detail |
| C2H6g05172 | 6:696,366-696,986 | + | - | CX6g043160 | LOC_Os06g02840 | Os06g0119200 | - | Detail |
| C2H6g24335 | 6:697,782-700,067 | - | C1H6g23901 | CX6g041674 | LOC_Os06g02850 | Os06g0119300 | - | Detail |
| C2H6g27453 | 6:709,901-710,182 | - | C1H6g01465 | CX6g045343 | LOC_Os06g02730 | Os06g0118000 | - | Detail |
| C2H6g00244 | 6:710,753-713,698 | - | C1H6g01465 | CX6g045343 | LOC_Os06g02900 | Os06g0119600 | - | Detail |
| C2H6g21566 | 6:725,411-726,055 | - | - | CX6g043685 | LOC_Os06g02930 | Os06g0119800 | - | Detail |
| C2H6g16841 | 6:727,048-727,710 | + | - | CX6g043160 | LOC_Os06g02940 | Os06g0119900 | - | Detail |
| C2H6g08083 | 6:737,041-739,592 | + | C1H6g23901 | CX6g045061 | LOC_Os06g03380 | Os06g0120200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |