| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g14869 | 3:6,815,165-6,815,375 | + | C2H3g16810 | - | - | - | - | Detail |
| C1H3g26151 | 3:6,816,729-6,817,870 | + | C2H3g01805 | CX3g031193 | LOC_Os03g14180 | Os03g0245800 | OsHSP26, OsHSP26.7 | Detail |
| C1H3g11403 | 3:6,817,996-6,819,095 | - | C2H3g04163 | CX3g028262 | LOC_Os03g14190 | Os03g0286500 | - | Detail |
| C1H3g05479 | 3:6,823,953-6,827,038 | - | C2H3g26968 | CX3g027333 | LOC_Os03g14210 | Os03g0246100 | - | Detail |
| C1H3g24069 | 3:6,849,853-6,858,192 | + | C2H3g26368 | CX3g025246 | LOC_Os03g14250 | Os03g0246500 | - | Detail |
| C1H3g04621 | 3:6,862,717-6,871,822 | - | C2H3g20168 | CX3g031009 | LOC_Os03g14260 | Os03g0246800 | - | Detail |
| C1H3g17875 | 3:6,877,161-6,878,794 | - | C2H3g04669 | CX3g031259 | LOC_Os03g14270 | Os03g0246900 | - | Detail |
| C1H3g11721 | 3:6,884,950-6,890,633 | - | C2H3g12251 | CX3g024987 | LOC_Os03g14280 | Os03g0247000 | - | Detail |
| C1H3g04193 | 3:6,893,244-6,895,196 | + | C2H3g19476 | CX3g025549 | LOC_Os03g14290 | Os03g0247100 | - | Detail |
| C1H3g02634 | 3:6,901,216-6,901,644 | + | C2H3g06079 | CX3g029027 | LOC_Os03g14300 | Os03g0247200 | - | Detail |
| C1H3g20245 | 3:6,904,426-6,907,206 | + | C2H3g03215 | CX3g027071 | LOC_Os03g14310 | Os03g0247300 | Sc, Sc-j | Detail |
| C1H3g23753 | 3:6,908,396-6,908,659 | + | C2H3g22875 | - | LOC_Os03g14320 | Os03g0247400 | - | Detail |
| C1H3g27748 | 3:6,914,256-6,915,546 | + | C2H3g16307 | CX3g029027 | LOC_Os03g14334 | Os03g0247600 | - | Detail |
| C1H3g31201 | 3:6,916,705-6,916,968 | + | C2H3g17890 | CX3g027944 | - | Os03g0247750 | - | Detail |
| C1H3g19658 | 3:6,922,305-6,925,192 | + | C2H3g21682 | CX3g030912 | LOC_Os03g14370 | Os03g0247900 | OsACR9 | Detail |
| C1H3g14669 | 3:6,927,648-6,935,109 | - | C2H3g29476 | CX3g029315 | LOC_Os03g14380 | Os03g0248000 | - | Detail |
| C1H3g02498 | 3:6,945,442-6,948,361 | - | C2H3g25743 | CX3g025347 | LOC_Os03g14400 | Os03g0248200 | - | Detail |
| C1H3g30991 | 3:6,949,776-6,952,262 | - | C2H3g25743 | CX3g027180 | LOC_Os03g14420 | Os03g0248300 | - | Detail |
| C1H3g05151 | 3:6,953,670-6,954,206 | - | C2H3g17020 | CX3g030378 | LOC_Os03g14440 | Os03g0248500 | - | Detail |
| C1H3g19724 | 3:6,956,988-6,961,763 | - | C2H3g16902 | CX3g028551 | LOC_Os03g14450 | Os03g0248600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g11310 | 6:1,537,223-1,538,105 | + | C1H6g12632 | CX6g045336 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| C2H6g12351 | 6:1,551,044-1,552,073 | + | C1H6g28945 | CX6g042238 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| C2H6g07431 | 6:1,553,345-1,560,023 | - | C1H6g16218 | CX6g041483 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| C2H6g08771 | 6:1,565,592-1,565,798 | - | - | CX6g042795 | LOC_Os06g04889 | Os06g0140900 | - | Detail |
| C2H6g06281 | 6:1,568,563-1,569,963 | - | C1H6g10901 | CX6g042963 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| C2H6g22276 | 6:1,571,005-1,574,212 | - | C1H6g22682 | CX6g042744 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| C2H6g22440 | 6:1,577,164-1,577,822 | - | C1H6g07568 | CX6g044396 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| C2H6g06397 | 6:1,584,919-1,585,698 | - | C1H6g14984 | - | LOC_Os06g05020 | Os06g0141400 | - | Detail |
| C2H6g02034 | 6:1,591,453-1,592,070 | - | C1H6g01608 | - | LOC_Os06g05010 | Os06g0142200 | - | Detail |
| C2H6g13986 | 6:1,596,693-1,597,253 | - | C1H6g04172 | - | LOC_Os06g05010 | Os06g0142350 | - | Detail |
| C2H6g28627 | 6:1,599,565-1,601,073 | + | C1H6g19864 | CX6g043146 | LOC_Os06g04970 | Os06g0142000 | - | Detail |
| C2H6g02748 | 6:1,602,170-1,604,257 | + | C1H6g19864 | CX6g043146 | LOC_Os06g04970 | Os06g0142050 | - | Detail |
| C2H6g19975 | 6:1,605,035-1,608,277 | + | C1H6g27997 | CX6g044459 | LOC_Os06g04980 | Os06g0142100 | - | Detail |
| C2H6g03882 | 6:1,609,422-1,610,072 | - | C1H6g15081 | - | LOC_Os06g04990 | Os06g0142200 | - | Detail |
| C2H6g29967 | 6:1,615,084-1,615,611 | - | C1H6g30995 | - | LOC_Os06g05000 | Os06g0142300 | - | Detail |
| C2H6g10296 | 6:1,622,811-1,623,389 | - | C1H6g18923 | - | LOC_Os06g05020 | Os06g0142400 | - | Detail |
| C2H6g07918 | 6:1,628,484-1,631,927 | + | C1H6g25792 | CX6g041298 | LOC_Os06g05050 | Os06g0142500 | - | Detail |
| C2H6g07121 | 6:1,635,275-1,640,239 | - | C1H6g15035 | CX6g042388 | LOC_Os06g05060 | Os06g0142600 | HD3B, Hd17, EF7, Ef7, OsELF3-1, OsELF3, ELF3_chr.6 | Detail |
| C2H6g10352 | 6:1,642,473-1,643,852 | - | C1H6g26949 | CX6g042647 | LOC_Os06g05070 | Os06g0142650 | MAK4 | Detail |
| C2H6g12414 | 6:1,644,837-1,647,316 | - | C1H6g04865 | CX6g043519 | LOC_Os06g05080 | Os06g0142700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |