| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g26939 | 3:5,827,730-5,829,663 | + | C2H3g21341 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C1H3g23318 | 3:5,830,907-5,831,606 | + | C2H3g03359 | CX3g025280 | LOC_Os03g12440 | - | - | Detail |
| C1H3g17135 | 3:5,832,929-5,841,582 | + | C2H3g24748 | CX3g030046 | LOC_Os03g12450 | Os03g0225500 | - | Detail |
| C1H3g25680 | 3:5,842,305-5,848,977 | + | C2H3g09129 | CX3g028144 | LOC_Os03g12460 | Os03g0225600 | - | Detail |
| C1H3g10808 | 3:5,850,410-5,855,399 | + | C2H3g02566 | CX3g025098 | LOC_Os03g12470 | Os03g0225700 | WAK25, OsWAK25 | Detail |
| C1H3g31142 | 3:5,859,958-5,861,394 | + | C2H3g16646 | CX3g026072 | LOC_Os03g12500 | Os03g0225900 | - | Detail |
| C1H3g02465 | 3:5,868,214-5,869,065 | - | C2H3g10692 | CX3g026153 | LOC_Os03g12510 | Os03g0226200 | Hb2, OsPgb1.2 | Detail |
| C1H3g31559 | 3:5,870,535-5,872,232 | + | C2H3g15869 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C1H3g14266 | 3:5,872,381-5,872,951 | + | C2H3g08794 | CX3g028573 | LOC_Os03g12520 | Os03g0226300 | - | Detail |
| C1H3g15877 | 3:5,878,805-5,883,431 | + | C2H3g29082 | CX3g027606 | LOC_Os03g12530 | Os03g0226400 | - | Detail |
| C1H3g27940 | 3:5,889,656-5,896,396 | + | C2H3g13286 | CX3g025975 | LOC_Os03g12550 | Os03g0226600 | - | Detail |
| C1H3g15687 | 3:5,897,248-5,899,040 | - | C2H3g30568 | CX3g027982 | LOC_Os03g12560 | Os03g0226700 | - | Detail |
| C1H3g18854 | 3:5,900,286-5,906,068 | + | C2H3g00790 | CX3g024984 | LOC_Os03g12570 | Os03g0226800 | CMT3b | Detail |
| C1H3g26728 | 3:5,907,227-5,910,038 | + | C2H3g22427 | CX3g027871 | LOC_Os03g12570 | Os03g0226901 | - | Detail |
| C1H3g26232 | 3:5,913,957-5,921,379 | + | C2H3g07335 | CX3g030829 | LOC_Os03g12590 | Os03g0227000 | - | Detail |
| C1H3g22048 | 3:5,923,945-5,931,937 | + | C2H3g16667 | CX3g026050 | LOC_Os03g12610 | Os03g0227300 | - | Detail |
| C1H3g19915 | 3:5,932,012-5,935,453 | - | C2H3g04602 | CX3g031339 | LOC_Os03g12620 | Os03g0227400 | - | Detail |
| C1H3g13701 | 3:5,949,947-5,953,406 | + | C2H3g27028 | CX3g027265 | LOC_Os03g12630 | Os03g0227500 | - | Detail |
| C1H3g10637 | 3:5,969,729-5,976,810 | + | C2H3g25912 | CX3g027504 | LOC_Os03g12660 | Os03g0227700 | OsDWF4, OsDWARF4, CYP90B2 | Detail |
| C1H3g02053 | 3:5,978,556-5,981,087 | + | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g17451 | 11:1,184,491-1,189,283 | - | C1H11g27572 | CX11g012012 | LOC_Os11g03640 | Os11g0130800 | - | Detail |
| C2H11g01890 | 11:1,201,290-1,202,489 | + | C1H11g12331 | CX11g014660 | LOC_Os11g03680 | Os11g0131300 | - | Detail |
| C2H11g04196 | 11:1,216,623-1,218,323 | - | C1H11g16996 | CX11g013342 | LOC_Os11g03710 | Os11g0131700 | - | Detail |
| C2H11g25900 | 11:1,221,236-1,228,314 | + | C1H11g09373 | CX11g013625 | LOC_Os11g03730 | Os11g0131900 | - | Detail |
| C2H11g04849 | 11:1,240,638-1,241,387 | - | C1H11g17299 | CX11g014144 | LOC_Os12g03500 | Os11g0132400 | - | Detail |
| C2H11g02386 | 11:1,247,781-1,255,436 | + | C1H11g06429 | CX11g014169 | LOC_Os11g03780 | Os11g0132600 | - | Detail |
| C2H11g23262 | 11:1,255,612-1,259,938 | - | C1H11g08673 | CX11g014088 | LOC_Os11g03794 | Os11g0132700 | - | Detail |
| C2H11g06747 | 11:1,276,073-1,278,592 | - | C1H11g06418 | CX11g012691 | LOC_Os11g03840 | Os11g0133100 | SDRLK-58 | Detail |
| C2H11g30103 | 11:1,279,980-1,285,685 | - | C1H11g00542 | CX11g011250 | LOC_Os11g03840 | Os11g0133100 | SDRLK-58 | Detail |
| C2H11g02363 | 11:1,285,693-1,286,964 | - | C1H11g11290 | CX11g011250 | LOC_Os11g03860 | Os11g0133300 | - | Detail |
| C2H11g04308 | 11:1,295,377-1,296,904 | + | C1H11g08572 | CX11g014552 | LOC_Os11g03890 | Os11g0133600 | - | Detail |
| C2H11g12322 | 11:1,297,672-1,302,962 | - | C1H11g08357 | CX11g012857 | LOC_Os11g03900 | Os11g0133700 | - | Detail |
| C2H11g15576 | 11:1,305,479-1,308,235 | + | C1H11g13859 | CX11g014129 | LOC_Os11g03910 | Os11g0133800 | - | Detail |
| C2H11g04970 | 11:1,308,790-1,309,449 | - | C1H11g02534 | CX11g011052 | LOC_Os11g03920 | Os11g0133900 | - | Detail |
| C2H11g02556 | 11:1,310,329-1,319,657 | - | C1H11g04708 | CX11g014909 | LOC_Os11g03940 | Os11g0134100 | - | Detail |
| C2H11g24670 | 11:1,321,174-1,321,529 | + | - | - | - | - | - | Detail |
| C2H11g14635 | 11:1,330,665-1,336,041 | + | C1H11g12502 | CX11g010964 | LOC_Os11g03970 | Os11g0134300 | - | Detail |
| C2H11g21024 | 11:1,336,174-1,337,067 | - | C1H11g15188 | CX11g012425 | LOC_Os11g03980 | Os11g0134400 | - | Detail |
| C2H11g02424 | 11:1,337,905-1,342,279 | - | C1H11g31463 | CX11g011211 | LOC_Os11g03990 | Os11g0134500 | - | Detail |
| C2H11g08675 | 11:1,342,972-1,344,019 | + | C1H11g04490 | CX12g017917 | LOC_Os11g04000 | Os11g0134600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |