| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17331 | 3:5,338,578-5,345,195 | + | C2H3g17746 | CX3g028416 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| C1H3g12951 | 3:5,345,585-5,351,080 | + | C2H3g08543 | CX3g030880 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| C1H3g14932 | 3:5,352,075-5,355,579 | + | C2H3g18859 | CX3g028514 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| C1H3g10644 | 3:5,356,021-5,361,678 | - | C2H3g25555 | CX3g029924 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| C1H3g04750 | 3:5,366,054-5,369,454 | - | C2H3g22606 | CX3g027534 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| C1H3g15538 | 3:5,371,578-5,375,503 | + | C2H3g22039 | CX3g027043 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| C1H3g09681 | 3:5,378,035-5,382,962 | - | C2H3g03744 | - | - | - | - | Detail |
| C1H3g00304 | 3:5,384,562-5,388,404 | - | C2H3g29664 | CX3g025722 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| C1H3g11825 | 3:5,415,400-5,421,453 | + | C2H3g24849 | CX3g029987 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| C1H3g00757 | 3:5,427,325-5,429,696 | - | C2H3g11270 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g04456 | 3:5,435,446-5,435,640 | - | C2H3g18287 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g30377 | 3:5,454,338-5,459,662 | + | C2H3g25916 | CX3g026583 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| C1H3g02997 | 3:5,460,442-5,463,830 | + | C2H3g12512 | CX3g026851 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| C1H3g12813 | 3:5,464,321-5,466,351 | - | C2H3g19342 | CX3g025630 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| C1H3g00186 | 3:5,474,194-5,475,087 | - | C2H3g13701 | CX3g030485 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| C1H3g15045 | 3:5,488,251-5,490,104 | + | C2H3g30038 | CX3g027591 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| C1H3g15740 | 3:5,491,793-5,492,971 | - | C2H3g05049 | CX3g029865 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| C1H3g17461 | 3:5,494,130-5,495,182 | - | C2H3g19799 | CX3g030660 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| C1H3g21782 | 3:5,501,406-5,505,435 | + | C2H3g02073 | CX3g030548 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| C1H3g16227 | 3:5,506,130-5,517,012 | - | C2H3g12443 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g01964 | 2:22,676,709-22,682,544 | + | C1H2g16471 | CX2g021866 | LOC_Os02g40010 | Os02g0613900 | - | Detail |
| C2H2g22743 | 2:22,688,713-22,692,442 | + | C1H2g13062 | CX2g021958 | LOC_Os02g40030 | Os02g0614100 | BC14, OsNST1 | Detail |
| C2H2g02654 | 2:22,693,206-22,694,946 | - | C1H2g21237 | - | LOC_Os02g40040 | Os02g0614200 | - | Detail |
| C2H2g02234 | 2:22,706,492-22,710,658 | + | C1H2g05612 | CX2g021283 | LOC_Os02g40070 | Os02g0614300 | - | Detail |
| C2H2g00288 | 2:22,712,798-22,714,730 | + | C1H2g01045 | CX2g024832 | LOC_Os02g40080 | Os02g0614400 | - | Detail |
| C2H2g14260 | 2:22,714,952-22,718,315 | - | C1H2g12688 | CX2g023153 | LOC_Os02g40090 | Os02g0614500 | - | Detail |
| C2H2g02297 | 2:22,720,954-22,725,778 | + | C1H2g10420 | CX2g021494 | LOC_Os02g40100 | Os02g0614600 | - | Detail |
| C2H2g21885 | 2:22,728,786-22,730,386 | - | C1H2g27230 | CX2g021090 | LOC_Os02g40110 | Os02g0614700 | - | Detail |
| C2H2g20688 | 2:22,765,124-22,766,503 | + | C1H2g18264 | CX2g024892 | LOC_Os02g40240 | Os02g0211600 | - | Detail |
| C2H2g24104 | 2:22,771,542-22,774,913 | + | C1H2g30063 | CX2g019718 | LOC_Os02g40130 | Os02g0615400 | - | Detail |
| C2H2g27798 | 2:22,783,252-22,787,422 | + | C1H2g05371 | CX2g023917 | LOC_Os02g40240 | Os02g0615800 | - | Detail |
| C2H2g07249 | 2:22,884,799-22,888,598 | + | C1H2g05371 | CX2g019718 | LOC_Os02g40180 | Os02g0615400 | - | Detail |
| C2H2g01203 | 2:22,894,275-22,894,777 | - | C1H2g26739 | CX2g021810 | LOC_Os02g43670 | Os02g0653400 | - | Detail |
| C2H2g08455 | 2:22,898,848-22,900,571 | - | C1H2g02395 | CX2g020249 | LOC_Os02g40270 | Os02g0616199 | - | Detail |
| C2H2g09185 | 2:22,903,863-22,909,731 | - | C1H2g19871 | CX2g022448 | LOC_Os02g40410 | Os02g0617100 | - | Detail |
| C2H2g01683 | 2:22,916,544-22,921,062 | - | C1H2g09487 | - | LOC_Os02g40420 | Os02g0617200 | - | Detail |
| C2H2g12073 | 2:22,922,333-22,935,597 | - | C1H2g18153 | CX2g019193 | LOC_Os02g40430 | Os02g0617300 | - | Detail |
| C2H2g17921 | 2:22,949,281-22,950,820 | + | C1H2g29661 | CX2g022735 | LOC_Os02g40440 | Os02g0617400 | - | Detail |
| C2H2g21511 | 2:22,951,498-22,960,471 | + | C1H2g22026 | CX2g022878 | LOC_Os02g40450 | Os02g0617500 | MER3, OsMER3 | Detail |
| C2H2g09254 | 2:22,960,540-22,963,886 | - | C1H2g23006 | CX2g020956 | LOC_Os02g40454 | Os02g0617600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |