| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17331 | 3:5,338,578-5,345,195 | + | C2H3g17746 | CX3g028416 | LOC_Os03g11520 | Os03g0213900 | - | Detail |
| C1H3g12951 | 3:5,345,585-5,351,080 | + | C2H3g08543 | CX3g030880 | LOC_Os03g11530 | Os03g0214000 | - | Detail |
| C1H3g14932 | 3:5,352,075-5,355,579 | + | C2H3g18859 | CX3g028514 | LOC_Os03g11540 | Os03g0214100 | OsRPA70b | Detail |
| C1H3g10644 | 3:5,356,021-5,361,678 | - | C2H3g25555 | CX3g029924 | LOC_Os03g11550 | Os03g0214200 | - | Detail |
| C1H3g04750 | 3:5,366,054-5,369,454 | - | C2H3g22606 | CX3g027534 | LOC_Os03g11560 | Os03g0214400 | - | Detail |
| C1H3g15538 | 3:5,371,578-5,375,503 | + | C2H3g22039 | CX3g027043 | LOC_Os03g11570 | Os03g0214600 | - | Detail |
| C1H3g09681 | 3:5,378,035-5,382,962 | - | C2H3g03744 | - | - | - | - | Detail |
| C1H3g00304 | 3:5,384,562-5,388,404 | - | C2H3g29664 | CX3g025722 | LOC_Os03g11590 | Os03g0215000 | - | Detail |
| C1H3g11825 | 3:5,415,400-5,421,453 | + | C2H3g24849 | CX3g029987 | LOC_Os03g11600 | Os03g0215200 | DL, dl(lop), lop, dl, dl1 | Detail |
| C1H3g00757 | 3:5,427,325-5,429,696 | - | C2H3g11270 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g04456 | 3:5,435,446-5,435,640 | - | C2H3g18287 | CX3g026708 | LOC_Os03g11614 | Os03g0215400 | LHS1, OsMADS1, LHS, lhs1, lhs, lhs2, op, nsr, MADS1, LHS1/OsMADS1, Lhs1, AFO | Detail |
| C1H3g30377 | 3:5,454,338-5,459,662 | + | C2H3g25916 | CX3g026583 | LOC_Os03g11650 | Os03g0215700 | - | Detail |
| C1H3g02997 | 3:5,460,442-5,463,830 | + | C2H3g12512 | CX3g026851 | LOC_Os03g11660 | Os03g0215800 | - | Detail |
| C1H3g12813 | 3:5,464,321-5,466,351 | - | C2H3g19342 | CX3g025630 | LOC_Os03g11670 | Os03g0215900 | OsPPR676, OsATP4 | Detail |
| C1H3g00186 | 3:5,474,194-5,475,087 | - | C2H3g13701 | CX3g030485 | LOC_Os03g11680 | Os03g0216000 | - | Detail |
| C1H3g15045 | 3:5,488,251-5,490,104 | + | C2H3g30038 | CX3g027591 | LOC_Os03g11690 | Os03g0216300 | - | Detail |
| C1H3g15740 | 3:5,491,793-5,492,971 | - | C2H3g05049 | CX3g029865 | LOC_Os03g11700 | Os03g0216400 | - | Detail |
| C1H3g17461 | 3:5,494,130-5,495,182 | - | C2H3g19799 | CX3g030660 | LOC_Os03g11710 | Os03g0216500 | - | Detail |
| C1H3g21782 | 3:5,501,406-5,505,435 | + | C2H3g02073 | CX3g030548 | LOC_Os03g11720 | Os03g0216600 | - | Detail |
| C1H3g16227 | 3:5,506,130-5,517,012 | - | C2H3g12443 | CX3g029221 | LOC_Os03g11734 | Os03g0216700 | OsFRDL1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25174 | 5:23,313,508-23,318,106 | + | C1H5g20148 | CX5g037678 | LOC_Os05g48600 | Os05g0559600 | OsGT43E | Detail |
| C2H5g23630 | 5:23,322,496-23,323,008 | + | C1H5g04745 | CX5g037832 | LOC_Os05g48610 | Os05g0559800 | - | Detail |
| C2H5g12589 | 5:23,323,209-23,333,187 | - | C1H5g10502 | CX5g040407 | LOC_Os05g48620 | Os05g0559900 | - | Detail |
| C2H5g00100 | 5:23,334,202-23,335,270 | + | C1H5g25744 | CX5g038817 | LOC_Os05g48630 | Os05g0560000 | - | Detail |
| C2H5g06003 | 5:23,335,749-23,338,647 | - | C1H5g19833 | CX5g038416 | LOC_Os05g48640 | Os05g0560100 | OsRopGEF2 | Detail |
| C2H5g16951 | 5:23,339,586-23,340,263 | - | C1H5g26191 | CX5g036968 | LOC_Os05g48650 | Os05g0560200 | OsDOG1L-2 | Detail |
| C2H5g04171 | 5:23,342,037-23,344,096 | - | C1H5g10477 | CX5g040994 | LOC_Os05g48660 | Os05g0560300 | - | Detail |
| C2H5g23278 | 5:23,347,409-23,353,039 | + | C1H5g07983 | CX5g040506 | LOC_Os05g48670 | Os05g0560400 | - | Detail |
| C2H5g11774 | 5:23,353,595-23,353,938 | - | C1H5g15622 | CX5g041006 | LOC_Os05g48680 | Os05g0560500 | - | Detail |
| C2H5g07077 | 5:23,357,253-23,358,293 | + | C1H5g18490 | CX5g039073 | LOC_Os05g48690 | Os05g0560600 | - | Detail |
| C2H5g25068 | 5:23,369,154-23,370,706 | - | C1H5g04118 | CX5g037700 | LOC_Os05g48700 | Os05g0560900 | OsGA2ox8 | Detail |
| C2H5g27839 | 5:23,389,673-23,389,900 | + | C1H5g06450 | CX5g037256 | LOC_Os05g48740 | Os05g0561400 | - | Detail |
| C2H5g17404 | 5:23,390,349-23,393,557 | - | C1H5g19616 | CX5g036713 | LOC_Os05g48750 | Os05g0561500 | - | Detail |
| C2H5g28708 | 5:23,398,380-23,402,322 | + | C1H5g06337 | CX5g037464 | LOC_Os05g48760 | Os05g0561600 | - | Detail |
| C2H5g03536 | 5:23,404,718-23,408,998 | - | C1H5g29811 | CX5g040205 | LOC_Os05g48790 | Os05g0562000 | - | Detail |
| C2H5g13005 | 5:23,414,234-23,417,141 | - | C1H5g21574 | CX5g037282 | LOC_Os05g48800 | Os05g0562200 | - | Detail |
| C2H5g23462 | 5:23,417,250-23,432,794 | - | C1H5g24863 | CX5g039085 | LOC_Os05g48820 | Os05g0562400 | - | Detail |
| C2H5g25280 | 5:23,434,954-23,435,676 | - | C1H5g03290 | CX5g039144 | LOC_Os05g48840 | Os05g0562800 | - | Detail |
| C2H5g28682 | 5:23,444,798-23,446,037 | + | C1H5g26594 | CX5g037488 | LOC_Os05g48850 | Os05g0563000 | OsSND2 | Detail |
| C2H5g09501 | 5:23,446,423-23,453,664 | - | C1H5g29749 | CX5g039932 | LOC_Os05g48855 | Os05g0563050 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |