| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g30216 | 3:5,198,326-5,200,912 | + | C2H3g29021 | CX3g029812 | LOC_Os03g11310 | Os03g0211600 | - | Detail |
| C1H3g24821 | 3:5,203,081-5,207,551 | + | C2H3g25607 | CX3g025107 | LOC_Os03g11320 | Os03g0211700 | - | Detail |
| C1H3g09091 | 3:5,208,685-5,214,433 | - | C2H3g25870 | CX3g030071 | LOC_Os03g11330 | Os03g0211800 | OsGAUT21 | Detail |
| C1H3g01352 | 3:5,220,339-5,224,494 | - | C2H3g12697 | CX3g026293 | LOC_Os03g11340 | Os03g0211900 | - | Detail |
| C1H3g14150 | 3:5,227,713-5,229,179 | + | C2H3g29397 | CX3g028521 | LOC_Os03g11350 | Os03g0212000 | - | Detail |
| C1H3g07134 | 3:5,229,841-5,233,119 | + | C2H3g17554 | CX3g031116 | LOC_Os03g11360 | Os03g0212200 | OsIRL7 | Detail |
| C1H3g30805 | 3:5,234,405-5,235,487 | + | C2H3g15476 | CX3g029879 | LOC_Os03g11370 | Os03g0212300 | - | Detail |
| C1H3g22328 | 3:5,237,173-5,240,298 | + | C2H3g29540 | CX3g030201 | LOC_Os03g11380 | Os03g0212400 | - | Detail |
| C1H3g28284 | 3:5,241,892-5,245,110 | + | C2H3g29934 | CX3g029371 | LOC_Os03g11400 | Os03g0212600 | - | Detail |
| C1H3g04782 | 3:5,246,942-5,251,578 | + | C2H3g06331 | CX3g027354 | LOC_Os03g11410 | Os03g0212700 | - | Detail |
| C1H3g09300 | 3:5,253,184-5,259,217 | - | C2H3g05367 | CX3g026591 | LOC_Os03g11420 | Os03g0212800 | Os3BGlu6 | Detail |
| C1H3g26134 | 3:5,266,966-5,270,560 | + | C2H3g18758 | CX3g029450 | LOC_Os03g11440 | Os03g0213100 | - | Detail |
| C1H3g26202 | 3:5,271,256-5,273,614 | + | C2H3g03518 | - | LOC_Os03g11450 | Os03g0213200 | - | Detail |
| C1H3g00805 | 3:5,280,116-5,289,682 | + | C2H3g28632 | CX3g027674 | LOC_Os03g11460 | Os03g0213300 | - | Detail |
| C1H3g03534 | 3:5,292,879-5,312,632 | - | C2H3g29945 | CX3g025181 | LOC_Os03g11470 | Os03g0213400 | - | Detail |
| C1H3g27429 | 3:5,315,196-5,315,696 | + | C2H3g00399 | CX3g027089 | LOC_Os03g11480 | Os03g0213500 | - | Detail |
| C1H3g11525 | 3:5,317,776-5,320,466 | + | C2H3g08162 | - | LOC_Os03g11490 | Os03g0213600 | - | Detail |
| C1H3g03448 | 3:5,320,489-5,326,565 | + | C2H3g01931 | CX3g025839 | LOC_Os03g11490 | Os03g0213600 | - | Detail |
| C1H3g09548 | 3:5,326,706-5,331,818 | - | C2H3g20966 | CX3g025219 | LOC_Os03g11500 | Os03g0213700 | - | Detail |
| C1H3g26492 | 3:5,332,558-5,335,923 | - | C2H3g14083 | CX3g031080 | LOC_Os03g11510 | Os03g0213800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25296 | 5:19,949,339-19,950,899 | + | C1H5g08499 | CX5g038701 | LOC_Os05g40320 | Os05g0481800 | - | Detail |
| C2H5g16978 | 5:19,954,426-19,956,732 | - | C1H5g14646 | CX5g037406 | LOC_Os05g40330 | Os05g0481900 | - | Detail |
| C2H5g15740 | 5:19,959,469-19,960,340 | - | C1H5g20454 | CX5g040861 | LOC_Os05g40360 | - | - | Detail |
| C2H5g23481 | 5:19,963,609-19,964,058 | + | - | - | - | - | - | Detail |
| C2H5g03648 | 5:19,980,408-19,980,900 | + | C1H5g07154 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C2H5g22897 | 5:19,986,863-19,989,044 | + | C1H5g08150 | CX5g037663 | LOC_Os05g40384 | Os05g0482400 | EUI1, eui1, GA16, 17ox, CYP714D1, EUI, CYP714D1/EUI, LG5 | Detail |
| C2H5g02533 | 5:19,989,980-19,990,615 | + | C1H5g11883 | CX5g038624 | LOC_Os05g40400 | Os05g0482501 | - | Detail |
| C2H5g14189 | 5:19,995,950-19,996,162 | + | - | - | LOC_Os01g32950 | - | - | Detail |
| C2H5g19376 | 5:19,999,401-20,003,017 | + | C1H5g01703 | CX5g040561 | LOC_Os05g40410 | Os05g0482600 | - | Detail |
| C2H5g12661 | 5:20,004,066-20,008,756 | - | C1H5g12944 | CX5g037367 | LOC_Os05g40420 | Os05g0482700 | - | Detail |
| C2H5g26553 | 5:20,069,631-20,071,191 | - | C1H5g09268 | CX5g039268 | LOC_Os05g40590 | Os05g0539300 | - | Detail |
| C2H5g23995 | 5:20,072,291-20,074,157 | - | C1H5g23451 | CX5g039268 | LOC_Os05g40610 | Os05g0539300 | - | Detail |
| C2H5g16811 | 5:20,076,087-20,077,457 | + | C1H5g31019 | CX5g039268 | LOC_Os05g40620 | Os05g0539300 | - | Detail |
| C2H5g19500 | 5:20,081,563-20,082,258 | - | C1H5g04267 | CX5g039418 | LOC_Os05g40630 | Os05g0484800 | - | Detail |
| C2H5g29609 | 5:20,092,664-20,095,397 | - | C1H5g28621 | CX5g036684 | LOC_Os05g40650 | Os05g0485000 | - | Detail |
| C2H5g13383 | 5:20,096,703-20,100,583 | + | C1H5g20371 | CX5g040127 | LOC_Os05g40700 | Os05g0485300 | - | Detail |
| C2H5g03405 | 5:20,102,800-20,104,299 | + | C1H5g01527 | CX5g040290 | LOC_Os05g40710 | Os05g0485400 | - | Detail |
| C2H5g25060 | 5:20,105,237-20,109,731 | - | C1H5g12798 | CX5g037319 | LOC_Os05g40720 | Os05g0485500 | - | Detail |
| C2H5g23682 | 5:20,110,274-20,111,659 | + | C1H5g09644 | CX5g037058 | LOC_Os05g40730 | Os05g0500300 | - | Detail |
| C2H5g20005 | 5:20,115,512-20,117,710 | - | C1H5g20204 | CX5g039326 | LOC_Os05g40740 | Os05g0485800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |