| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g23847 | 3:5,074,164-5,076,920 | + | C2H3g02775 | CX3g030551 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| C1H3g19795 | 3:5,077,599-5,082,271 | - | C2H3g21926 | CX3g025131 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| C1H3g29509 | 3:5,083,675-5,084,148 | + | C2H3g02600 | CX3g026202 | LOC_Os03g11060 | Os03g0209000 | - | Detail |
| C1H3g10782 | 3:5,093,738-5,095,149 | + | C2H3g29617 | CX3g026445 | LOC_Os03g11100 | Os03g0209400 | GOT1B, GLUP2/GOT1B, GPA4 | Detail |
| C1H3g28553 | 3:5,095,752-5,100,489 | - | C2H3g20518 | CX3g027814 | LOC_Os03g11110 | Os03g0209500 | - | Detail |
| C1H3g28595 | 3:5,104,579-5,112,065 | + | C2H3g02047 | CX3g027707 | LOC_Os03g11120 | Os03g0209600 | - | Detail |
| C1H3g28031 | 3:5,112,641-5,115,756 | + | C2H3g27933 | CX3g029679 | LOC_Os03g15190 | Os03g0209700 | - | Detail |
| C1H3g31436 | 3:5,118,643-5,128,768 | + | C2H3g21412 | CX3g026421 | LOC_Os03g11140 | Os03g0209800 | - | Detail |
| C1H3g26339 | 3:5,133,030-5,133,368 | - | C2H3g16472 | CX3g027593 | LOC_Os03g11160 | Os03g0210000 | - | Detail |
| C1H3g24055 | 3:5,135,527-5,135,880 | - | C2H3g27277 | CX3g025375 | LOC_Os03g11170 | Os03g0210100 | - | Detail |
| C1H3g27613 | 3:5,138,280-5,138,636 | - | C2H3g18125 | CX3g028377 | LOC_Os03g11180 | Os03g0210200 | - | Detail |
| C1H3g13004 | 3:5,142,266-5,149,103 | - | C2H3g21913 | CX3g029308 | LOC_Os03g11200 | Os03g0210400 | - | Detail |
| C1H3g15282 | 3:5,152,250-5,154,481 | + | C2H3g25075 | CX3g030415 | LOC_Os03g11210 | Os03g0210500 | - | Detail |
| C1H3g18916 | 3:5,157,253-5,158,398 | - | C2H3g24832 | CX3g031148 | LOC_Os03g11220 | Os03g0210600 | - | Detail |
| C1H3g29587 | 3:5,159,200-5,160,188 | + | C2H3g17169 | CX3g025909 | LOC_Os03g11230 | Os03g0210700 | - | Detail |
| C1H3g28959 | 3:5,160,757-5,170,367 | - | C2H3g29083 | CX3g029919 | LOC_Os03g11240 | Os03g0210800 | - | Detail |
| C1H3g06712 | 3:5,174,708-5,175,186 | + | C2H3g10848 | CX3g028792 | LOC_Os03g11250 | Os03g0210900 | - | Detail |
| C1H3g11024 | 3:5,178,358-5,180,068 | + | C2H3g14713 | CX3g028627 | LOC_Os03g11260 | Os03g0211100 | - | Detail |
| C1H3g11102 | 3:5,189,026-5,194,028 | + | - | - | - | - | - | Detail |
| C1H3g14759 | 3:5,194,532-5,196,764 | - | C2H3g19439 | CX3g028056 | LOC_Os03g11300 | Os03g0211500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g01892 | 10:10,437,095-10,437,779 | - | C1H10g22659 | - | - | - | - | Detail |
| C2H10g28252 | 10:10,455,310-10,459,721 | + | C1H10g20546 | CX10g008168 | LOC_Os10g21460 | Os10g0358600 | - | Detail |
| C2H10g12273 | 10:10,461,766-10,464,428 | - | C1H10g14022 | CX10g010475 | LOC_Os10g21470 | Os10g0358700 | - | Detail |
| C2H10g29078 | 10:10,474,124-10,476,644 | - | C1H10g29945 | CX10g009930 | LOC_Os10g21490 | - | - | Detail |
| C2H10g02652 | 10:10,488,771-10,489,913 | + | C1H10g16528 | CX10g008439 | LOC_Os10g21540 | Os10g0359200 | - | Detail |
| C2H10g18902 | 10:10,498,404-10,501,797 | - | C1H10g18664 | CX10g009618 | LOC_Os10g21560 | Os10g0359500 | - | Detail |
| C2H10g05637 | 10:10,514,587-10,516,735 | - | C1H10g18874 | CX10g010522 | LOC_Os10g21590 | Os10g0360100 | - | Detail |
| C2H10g27251 | 10:10,521,535-10,522,304 | - | C1H10g17548 | - | - | - | - | Detail |
| C2H10g25817 | 10:10,529,597-10,529,976 | - | C1H10g10032 | - | - | - | - | Detail |
| C2H10g24961 | 10:10,536,850-10,540,537 | + | C1H10g30481 | CX10g007795 | LOC_Os10g21800 | Os10g0360800 | - | Detail |
| C2H10g25330 | 10:10,542,442-10,547,040 | + | - | - | - | - | - | Detail |
| C2H10g16627 | 10:10,543,097-10,546,184 | - | C1H10g19484 | CX10g010771 | LOC_Os10g21660 | - | - | Detail |
| C2H10g16136 | 10:10,557,714-10,558,349 | - | C1H5g20408 | - | - | - | - | Detail |
| C2H10g16733 | 10:10,563,595-10,563,995 | + | - | - | - | - | - | Detail |
| C2H10g30610 | 10:10,564,877-10,565,523 | + | - | - | - | - | - | Detail |
| C2H10g05328 | 10:10,572,798-10,573,292 | + | C1H10g15818 | CX10g007732 | LOC_Os10g21670 | Os10g0361000 | - | Detail |
| C2H10g20812 | 10:10,588,844-10,589,320 | + | C1H10g09092 | CX10g009951 | LOC_Os10g21670 | Os10g0361300 | - | Detail |
| C2H10g05563 | 10:10,600,692-10,601,414 | - | C1H10g28163 | CX10g007540 | - | - | - | Detail |
| C2H10g24548 | 10:10,604,322-10,604,825 | + | C1H10g27379 | CX10g008677 | LOC_Os10g21790 | Os10g0361900 | - | Detail |
| C2H10g01089 | 10:10,609,788-10,621,213 | - | C1H10g20202 | CX10g010859 | LOC_Os10g21810 | Os10g0362300 | HK5, OHK3b, OHK3, HK, OsHK5, Crl3, Ohk3, OsHK2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |