| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g04729 | 3:4,611,926-4,613,460 | - | C2H3g24222 | CX3g030929 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| C1H3g24941 | 3:4,626,118-4,626,506 | + | C2H3g01513 | - | - | - | - | Detail |
| C1H3g23090 | 3:4,634,713-4,636,287 | - | C2H3g16295 | CX3g026889 | LOC_Os03g10220 | - | - | Detail |
| C1H3g13438 | 3:4,637,520-4,640,553 | - | C2H3g19804 | CX3g026154 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| C1H3g16749 | 3:4,640,745-4,645,102 | + | C2H3g09522 | CX3g028745 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| C1H3g12272 | 3:4,650,035-4,651,210 | + | C2H3g01585 | CX3g029096 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| C1H3g00274 | 3:4,660,923-4,662,003 | - | C2H3g23420 | CX3g031305 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| C1H3g07008 | 3:4,678,681-4,679,923 | + | C2H3g26891 | CX3g025392 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| C1H3g12286 | 3:4,687,802-4,689,563 | + | C2H3g01636 | CX3g029912 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| C1H3g29696 | 3:4,695,612-4,696,359 | + | C2H3g23926 | CX3g028962 | - | - | - | Detail |
| C1H3g13020 | 3:4,697,511-4,699,802 | + | C2H3g07176 | CX3g025427 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| C1H3g29298 | 3:4,699,933-4,704,069 | - | C2H3g17766 | CX3g027963 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| C1H3g01933 | 3:4,707,172-4,710,106 | - | C2H3g08890 | CX3g025362 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| C1H3g30301 | 3:4,711,278-4,713,578 | - | C2H3g09465 | CX3g031231 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| C1H3g28372 | 3:4,717,317-4,719,594 | + | C2H3g19650 | CX3g028366 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| C1H3g07769 | 3:4,719,979-4,724,128 | - | C2H3g21201 | CX3g026809 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| C1H3g03267 | 3:4,724,286-4,726,332 | + | C2H3g08749 | - | LOC_Os03g10410 | Os03g0201200 | - | Detail |
| C1H3g26783 | 3:4,726,856-4,729,237 | + | C2H3g27980 | CX3g027641 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| C1H3g14289 | 3:4,739,963-4,742,807 | + | C2H3g05108 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C1H3g07517 | 3:4,743,790-4,746,012 | - | C2H3g04674 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g05795 | 8:5,405,833-5,411,314 | + | C1H8g10324 | CX8g053552 | LOC_Os08g10550 | Os08g0206400 | OsHAK12 | Detail |
| C2H8g11546 | 8:5,411,983-5,414,194 | - | C1H8g01878 | CX8g051238 | LOC_Os08g10560 | Os08g0206500 | OsNF-YC5, HAP5F | Detail |
| C2H8g04466 | 8:5,416,544-5,421,884 | + | C1H8g25871 | CX8g050546 | LOC_Os08g10570 | Os08g0206600 | - | Detail |
| C2H8g23708 | 8:5,424,092-5,424,514 | - | - | - | - | - | - | Detail |
| C2H8g11250 | 8:5,425,585-5,431,851 | + | C1H8g07289 | CX8g051405 | LOC_Os08g10590 | Os08g0206800 | - | Detail |
| C2H8g09282 | 8:5,440,162-5,445,062 | + | C1H8g00869 | CX8g050428 | LOC_Os08g10600 | Os08g0206900 | SPL29, UAP1 | Detail |
| C2H8g13646 | 8:5,445,100-5,446,644 | - | C1H8g08863 | CX8g054192 | LOC_Os08g10604 | Os08g0206950 | - | Detail |
| C2H8g07869 | 8:5,447,261-5,449,178 | - | C1H8g04811 | CX8g054192 | LOC_Os08g10608 | Os08g0207000 | - | Detail |
| C2H8g16302 | 8:5,482,123-5,484,782 | + | C1H8g15204 | CX8g052133 | LOC_Os08g10630 | Os08g0207500 | OsZIP4 | Detail |
| C2H8g10656 | 8:5,486,653-5,494,794 | + | C1H8g21614 | CX8g053560 | LOC_Os08g10649 | Os08g0207600 | - | Detail |
| C2H8g12003 | 8:5,508,945-5,509,817 | - | C1H8g11104 | CX8g051737 | LOC_Os08g11760 | Os08g0213200 | - | Detail |
| C2H8g00115 | 8:5,519,214-5,520,303 | + | C1H8g20873 | - | - | - | - | Detail |
| C2H8g21063 | 8:5,527,213-5,528,314 | + | - | - | LOC_Os08g11720 | Os08g0213400 | - | Detail |
| C2H8g22111 | 8:5,592,163-5,592,506 | + | C1H8g22777 | - | LOC_Os08g11490 | Os08g0215400 | - | Detail |
| C2H8g29935 | 8:5,598,365-5,599,471 | - | C1H8g00604 | CX8g052759 | LOC_Os08g11480 | - | - | Detail |
| C2H8g23347 | 8:5,623,167-5,623,827 | + | C1H8g31336 | CX8g052901 | - | Os08g0428400 | - | Detail |
| C2H8g01129 | 8:5,666,831-5,667,231 | + | C1H8g02896 | CX8g052054 | LOC_Os08g12449 | - | - | Detail |
| C2H8g08905 | 8:5,692,710-5,693,586 | - | C1H8g31876 | CX8g052252 | LOC_Os08g12520 | Os08g0222100 | - | Detail |
| C2H8g10557 | 8:5,751,730-5,752,608 | - | C1H8g31876 | CX8g051723 | LOC_Os08g12520 | Os08g0222100 | - | Detail |
| C2H8g21947 | 8:5,769,907-5,770,610 | - | C1H8g26829 | CX8g054269 | - | Os08g0270400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |