| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13450 | 3:4,033,717-4,035,834 | + | C2H3g10684 | CX3g026706 | LOC_Os03g08860 | Os03g0187600 | OsGRAM | Detail |
| C1H3g23881 | 3:4,038,014-4,039,794 | + | C2H3g13978 | CX3g030725 | LOC_Os03g08870 | Os03g0187700 | - | Detail |
| C1H3g03880 | 3:4,040,968-4,042,167 | - | C2H3g19491 | CX3g025062 | LOC_Os03g08880 | Os03g0187800 | OsPUP1 | Detail |
| C1H3g16094 | 3:4,054,214-4,059,830 | + | C2H3g07130 | CX3g031032 | LOC_Os03g08900 | Os03g0188100 | OsMATE1 | Detail |
| C1H3g05331 | 3:4,060,815-4,061,876 | - | C2H3g06873 | CX3g024958 | LOC_Os03g08920 | Os03g0188200 | - | Detail |
| C1H3g20727 | 3:4,073,530-4,075,118 | + | C2H3g17114 | CX3g029018 | LOC_Os03g08930 | Os03g0188400 | OsbHLH96 | Detail |
| C1H3g00664 | 3:4,080,251-4,080,637 | - | C2H3g22297 | CX3g027139 | - | Os03g0188500 | - | Detail |
| C1H3g17061 | 3:4,097,305-4,098,515 | + | C2H3g19207 | CX3g028802 | LOC_Os03g08960 | Os03g0188900 | - | Detail |
| C1H3g18298 | 3:4,105,353-4,105,883 | + | C2H3g07421 | CX3g026805 | LOC_Os03g08970 | Os03g0189100 | - | Detail |
| C1H3g19818 | 3:4,109,705-4,111,030 | - | C2H3g08533 | CX3g027676 | LOC_Os03g08980 | Os03g0189300 | - | Detail |
| C1H3g18359 | 3:4,111,701-4,112,398 | - | C2H3g28618 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C1H3g16437 | 3:4,112,410-4,113,314 | - | C2H3g11626 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C1H3g29808 | 3:4,117,433-4,117,647 | - | C2H3g03286 | CX3g030934 | LOC_Os03g09020 | Os03g0189400 | - | Detail |
| C1H3g25212 | 3:4,119,115-4,122,175 | - | C2H3g07018 | CX3g030934 | LOC_Os03g09020 | Os03g0189600 | - | Detail |
| C1H3g17759 | 3:4,130,906-4,131,652 | + | C2H3g15705 | CX3g030414 | LOC_Os03g09045 | Os03g0190000 | - | Detail |
| C1H3g10345 | 3:4,133,267-4,136,241 | - | C2H3g04200 | CX3g029542 | LOC_Os03g09060 | Os03g0190100 | - | Detail |
| C1H3g09287 | 3:4,138,896-4,142,325 | - | C2H3g20959 | CX3g031332 | LOC_Os03g09070 | Os03g0190300 | - | Detail |
| C1H3g02100 | 3:4,143,641-4,146,556 | - | - | CX3g029204 | - | Os03g0190500 | - | Detail |
| C1H3g05709 | 3:4,149,489-4,153,482 | - | C2H3g15387 | CX3g031087 | LOC_Os03g09080 | Os03g0190800 | - | Detail |
| C1H3g10832 | 3:4,155,243-4,158,318 | - | C2H3g01761 | CX3g028138 | LOC_Os03g09090 | Os03g0190900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g13325 | 4:23,061,378-23,062,726 | + | C1H4g04293 | CX4g032173 | LOC_Os04g45110 | Os04g0533700 | - | Detail |
| C2H4g03644 | 4:23,064,571-23,065,889 | + | C1H4g02662 | CX4g034142 | LOC_Os04g45110 | Os04g0533800 | - | Detail |
| C2H4g29508 | 4:23,066,728-23,067,296 | - | C1H4g24399 | CX4g035061 | LOC_Os04g45130 | Os04g0533900 | - | Detail |
| C2H4g00685 | 4:23,071,158-23,073,252 | + | C1H4g27874 | CX4g035081 | LOC_Os04g45140 | Os04g0534000 | - | Detail |
| C2H4g06663 | 4:23,077,733-23,083,462 | + | C1H4g24867 | CX4g034679 | LOC_Os04g45160 | Os04g0534100 | - | Detail |
| C2H4g23267 | 4:23,086,827-23,092,064 | + | C1H4g25917 | CX4g035606 | LOC_Os04g45170 | Os04g0534200 | - | Detail |
| C2H4g02980 | 4:23,092,484-23,095,736 | + | C1H4g04893 | CX4g035479 | LOC_Os04g45180 | Os04g0534300 | - | Detail |
| C2H4g26245 | 4:23,096,588-23,099,122 | - | C1H4g22337 | CX4g033395 | LOC_Os04g45190 | Os04g0534400 | - | Detail |
| C2H4g14817 | 4:23,099,942-23,102,961 | - | C1H4g09749 | CX4g033395 | LOC_Os04g45200 | Os04g0534500 | - | Detail |
| C2H4g22478 | 4:23,103,650-23,104,318 | + | C1H4g00533 | CX4g032262 | LOC_Os04g45210 | Os04g0534600 | PEX11-4, OsPEX11-4 | Detail |
| C2H4g02373 | 4:23,107,942-23,120,196 | + | C1H4g19114 | - | LOC_Os04g45240 | Os04g0535000 | - | Detail |
| C2H4g14595 | 4:23,123,972-23,126,517 | - | C1H4g29726 | CX4g033854 | LOC_Os04g45270 | Os04g0535200 | - | Detail |
| C2H4g23856 | 4:23,131,943-23,134,322 | - | C1H4g01959 | CX4g034978 | LOC_Os04g45280 | Os04g0535400 | - | Detail |
| C2H4g26752 | 4:23,141,170-23,147,441 | + | C1H4g06579 | CX4g035610 | LOC_Os04g45290 | Os04g0535600 | - | Detail |
| C2H4g06470 | 4:23,154,778-23,156,860 | - | C1H4g20764 | CX4g032877 | LOC_Os04g45330 | Os04g0536300 | YAB5, OsYABBY5, OsYAB3, YAB3, Os YABBY5, TOB1 | Detail |
| C2H4g12296 | 4:23,162,279-23,163,469 | - | C1H4g08042 | CX4g036228 | LOC_Os04g45340 | Os04g0536500 | - | Detail |
| C2H4g14415 | 4:23,180,632-23,182,410 | + | - | CX4g031509 | LOC_Os04g56690 | Os04g0537100 | - | Detail |
| C2H4g22304 | 4:23,190,250-23,192,821 | + | C1H4g08874 | CX4g032484 | LOC_Os04g45460 | Os04g0537800 | - | Detail |
| C2H4g19071 | 4:23,193,136-23,197,796 | - | C1H4g01755 | CX4g032962 | LOC_Os04g45470 | Os04g0537900 | GLUP3, glup3(esp7), esp7, glup3, OsVPE1, VPE1, OsaLeg3 | Detail |
| C2H4g24565 | 4:23,199,728-23,203,421 | + | C1H4g06397 | CX4g031799 | LOC_Os04g45480 | Os04g0538000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |