| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13450 | 3:4,033,717-4,035,834 | + | C2H3g10684 | CX3g026706 | LOC_Os03g08860 | Os03g0187600 | OsGRAM | Detail |
| C1H3g23881 | 3:4,038,014-4,039,794 | + | C2H3g13978 | CX3g030725 | LOC_Os03g08870 | Os03g0187700 | - | Detail |
| C1H3g03880 | 3:4,040,968-4,042,167 | - | C2H3g19491 | CX3g025062 | LOC_Os03g08880 | Os03g0187800 | OsPUP1 | Detail |
| C1H3g16094 | 3:4,054,214-4,059,830 | + | C2H3g07130 | CX3g031032 | LOC_Os03g08900 | Os03g0188100 | OsMATE1 | Detail |
| C1H3g05331 | 3:4,060,815-4,061,876 | - | C2H3g06873 | CX3g024958 | LOC_Os03g08920 | Os03g0188200 | - | Detail |
| C1H3g20727 | 3:4,073,530-4,075,118 | + | C2H3g17114 | CX3g029018 | LOC_Os03g08930 | Os03g0188400 | OsbHLH96 | Detail |
| C1H3g00664 | 3:4,080,251-4,080,637 | - | C2H3g22297 | CX3g027139 | - | Os03g0188500 | - | Detail |
| C1H3g17061 | 3:4,097,305-4,098,515 | + | C2H3g19207 | CX3g028802 | LOC_Os03g08960 | Os03g0188900 | - | Detail |
| C1H3g18298 | 3:4,105,353-4,105,883 | + | C2H3g07421 | CX3g026805 | LOC_Os03g08970 | Os03g0189100 | - | Detail |
| C1H3g19818 | 3:4,109,705-4,111,030 | - | C2H3g08533 | CX3g027676 | LOC_Os03g08980 | Os03g0189300 | - | Detail |
| C1H3g18359 | 3:4,111,701-4,112,398 | - | C2H3g28618 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C1H3g16437 | 3:4,112,410-4,113,314 | - | C2H3g11626 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C1H3g29808 | 3:4,117,433-4,117,647 | - | C2H3g03286 | CX3g030934 | LOC_Os03g09020 | Os03g0189400 | - | Detail |
| C1H3g25212 | 3:4,119,115-4,122,175 | - | C2H3g07018 | CX3g030934 | LOC_Os03g09020 | Os03g0189600 | - | Detail |
| C1H3g17759 | 3:4,130,906-4,131,652 | + | C2H3g15705 | CX3g030414 | LOC_Os03g09045 | Os03g0190000 | - | Detail |
| C1H3g10345 | 3:4,133,267-4,136,241 | - | C2H3g04200 | CX3g029542 | LOC_Os03g09060 | Os03g0190100 | - | Detail |
| C1H3g09287 | 3:4,138,896-4,142,325 | - | C2H3g20959 | CX3g031332 | LOC_Os03g09070 | Os03g0190300 | - | Detail |
| C1H3g02100 | 3:4,143,641-4,146,556 | - | - | CX3g029204 | - | Os03g0190500 | - | Detail |
| C1H3g05709 | 3:4,149,489-4,153,482 | - | C2H3g15387 | CX3g031087 | LOC_Os03g09080 | Os03g0190800 | - | Detail |
| C1H3g10832 | 3:4,155,243-4,158,318 | - | C2H3g01761 | CX3g028138 | LOC_Os03g09090 | Os03g0190900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17957 | 12:19,825,339-19,828,955 | - | - | - | - | - | - | Detail |
| C2H12g00857 | 12:19,836,424-19,839,405 | - | C1H12g12899 | CX12g015511 | LOC_Os12g38730 | Os12g0576300 | - | Detail |
| C2H12g17120 | 12:19,843,002-19,846,719 | - | C1H12g10259 | CX12g016341 | LOC_Os12g38750 | Os12g0576600 | - | Detail |
| C2H12g04894 | 12:19,854,539-19,857,748 | - | C1H12g21793 | CX12g017028 | LOC_Os12g38760 | Os12g0576700 | - | Detail |
| C2H12g26878 | 12:19,862,311-19,865,959 | - | C1H12g30700 | CX12g016600 | LOC_Os12g38770 | Os12g0576750 | PAP1B, OsPAP1b, NPP2, OsNPP2 | Detail |
| C2H12g26810 | 12:19,867,353-19,873,882 | - | C1H12g05519 | CX12g017595 | LOC_Os12g38780 | Os12g0576900 | - | Detail |
| C2H12g06238 | 12:19,875,946-19,878,170 | + | C1H12g22000 | CX12g017201 | LOC_Os12g38790 | Os12g0577000 | - | Detail |
| C2H12g22098 | 12:19,879,316-19,887,066 | + | C1H12g15638 | CX12g016939 | LOC_Os12g38800 | Os12g0577100 | - | Detail |
| C2H12g08874 | 12:19,892,972-19,894,012 | + | C1H12g30406 | CX12g017608 | LOC_Os12g38810 | Os12g0577200 | - | Detail |
| C2H12g22738 | 12:19,915,029-19,920,428 | + | C1H12g21439 | CX12g015208 | LOC_Os12g38850 | Os12g0577600 | - | Detail |
| C2H12g29158 | 12:19,921,945-19,924,327 | - | C1H12g00519 | CX12g018076 | LOC_Os12g38860 | Os12g0577700 | - | Detail |
| C2H12g06115 | 12:19,928,181-19,934,490 | - | C1H12g00369 | CX12g015574 | LOC_Os12g38870 | Os12g0577800 | - | Detail |
| C2H12g21149 | 12:19,948,275-19,950,104 | - | C1H12g31425 | CX12g017526 | LOC_Os12g38880 | Os12g0578000 | - | Detail |
| C2H12g11743 | 12:19,951,241-19,951,904 | + | C1H12g00225 | CX12g015487 | - | Os12g0530100 | - | Detail |
| C2H12g17013 | 12:19,954,198-19,958,515 | + | C1H12g19103 | CX12g016002 | LOC_Os12g38900 | Os12g0578200 | - | Detail |
| C2H12g27102 | 12:19,961,689-19,962,201 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g04289 | 12:19,962,292-19,966,033 | + | C1H12g25977 | CX12g018018 | LOC_Os12g38910 | Os12g0578300 | - | Detail |
| C2H12g06963 | 12:19,966,563-19,970,812 | + | C1H12g22422 | CX12g017088 | LOC_Os12g38920 | Os12g0578400 | - | Detail |
| C2H12g18495 | 12:19,971,081-19,976,738 | - | C1H12g15232 | CX12g016623 | LOC_Os12g38930 | Os12g0578500 | - | Detail |
| C2H12g09933 | 12:19,980,215-19,981,300 | - | C1H12g27740 | CX12g015550 | LOC_Os12g38940 | Os12g0578600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |