| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13450 | 3:4,033,717-4,035,834 | + | C2H3g10684 | CX3g026706 | LOC_Os03g08860 | Os03g0187600 | OsGRAM | Detail |
| C1H3g23881 | 3:4,038,014-4,039,794 | + | C2H3g13978 | CX3g030725 | LOC_Os03g08870 | Os03g0187700 | - | Detail |
| C1H3g03880 | 3:4,040,968-4,042,167 | - | C2H3g19491 | CX3g025062 | LOC_Os03g08880 | Os03g0187800 | OsPUP1 | Detail |
| C1H3g16094 | 3:4,054,214-4,059,830 | + | C2H3g07130 | CX3g031032 | LOC_Os03g08900 | Os03g0188100 | OsMATE1 | Detail |
| C1H3g05331 | 3:4,060,815-4,061,876 | - | C2H3g06873 | CX3g024958 | LOC_Os03g08920 | Os03g0188200 | - | Detail |
| C1H3g20727 | 3:4,073,530-4,075,118 | + | C2H3g17114 | CX3g029018 | LOC_Os03g08930 | Os03g0188400 | OsbHLH96 | Detail |
| C1H3g00664 | 3:4,080,251-4,080,637 | - | C2H3g22297 | CX3g027139 | - | Os03g0188500 | - | Detail |
| C1H3g17061 | 3:4,097,305-4,098,515 | + | C2H3g19207 | CX3g028802 | LOC_Os03g08960 | Os03g0188900 | - | Detail |
| C1H3g18298 | 3:4,105,353-4,105,883 | + | C2H3g07421 | CX3g026805 | LOC_Os03g08970 | Os03g0189100 | - | Detail |
| C1H3g19818 | 3:4,109,705-4,111,030 | - | C2H3g08533 | CX3g027676 | LOC_Os03g08980 | Os03g0189300 | - | Detail |
| C1H3g18359 | 3:4,111,701-4,112,398 | - | C2H3g28618 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C1H3g16437 | 3:4,112,410-4,113,314 | - | C2H3g11626 | CX3g030934 | LOC_Os03g08999 | Os03g0189400 | - | Detail |
| C1H3g29808 | 3:4,117,433-4,117,647 | - | C2H3g03286 | CX3g030934 | LOC_Os03g09020 | Os03g0189400 | - | Detail |
| C1H3g25212 | 3:4,119,115-4,122,175 | - | C2H3g07018 | CX3g030934 | LOC_Os03g09020 | Os03g0189600 | - | Detail |
| C1H3g17759 | 3:4,130,906-4,131,652 | + | C2H3g15705 | CX3g030414 | LOC_Os03g09045 | Os03g0190000 | - | Detail |
| C1H3g10345 | 3:4,133,267-4,136,241 | - | C2H3g04200 | CX3g029542 | LOC_Os03g09060 | Os03g0190100 | - | Detail |
| C1H3g09287 | 3:4,138,896-4,142,325 | - | C2H3g20959 | CX3g031332 | LOC_Os03g09070 | Os03g0190300 | - | Detail |
| C1H3g02100 | 3:4,143,641-4,146,556 | - | - | CX3g029204 | - | Os03g0190500 | - | Detail |
| C1H3g05709 | 3:4,149,489-4,153,482 | - | C2H3g15387 | CX3g031087 | LOC_Os03g09080 | Os03g0190800 | - | Detail |
| C1H3g10832 | 3:4,155,243-4,158,318 | - | C2H3g01761 | CX3g028138 | LOC_Os03g09090 | Os03g0190900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g18049 | 8:1,567,675-1,573,385 | - | C1H8g00108 | CX8g052513 | LOC_Os08g04120 | Os08g0135300 | - | Detail |
| C2H8g13232 | 8:1,576,269-1,580,086 | + | C1H8g10422 | CX8g053655 | LOC_Os08g04130 | Os08g0135400 | OsSIRHC-2 | Detail |
| C2H8g04072 | 8:1,580,475-1,581,306 | + | C1H8g13709 | CX8g052743 | LOC_Os08g04140 | Os08g0135500 | - | Detail |
| C2H8g24823 | 8:1,582,346-1,584,111 | - | C1H8g28692 | CX8g050673 | LOC_Os08g04150 | Os08g0135600 | - | Detail |
| C2H8g27721 | 8:1,585,583-1,592,890 | + | C1H8g07325 | CX8g052502 | LOC_Os08g04170 | Os08g0135800 | - | Detail |
| C2H8g08998 | 8:1,596,220-1,599,494 | + | C1H8g11042 | CX8g051906 | LOC_Os08g04180 | Os08g0135900 | - | Detail |
| C2H8g08268 | 8:1,601,062-1,606,102 | - | C1H8g04366 | CX8g054176 | LOC_Os08g04190 | Os08g0136100 | - | Detail |
| C2H8g13434 | 8:1,614,542-1,615,865 | - | C1H8g28554 | CX8g052086 | LOC_Os08g04210 | Os08g0136300 | - | Detail |
| C2H8g00264 | 8:1,619,489-1,620,728 | - | C1H8g18663 | CX8g053466 | LOC_Os08g04230 | Os08g0136500 | - | Detail |
| C2H8g19118 | 8:1,623,028-1,623,465 | - | C1H8g00751 | CX8g054338 | LOC_Os08g04240 | Os08g0136700 | - | Detail |
| C2H8g22173 | 8:1,623,734-1,624,045 | - | C1H8g03314 | CX8g054338 | LOC_Os08g04240 | Os08g0136700 | - | Detail |
| C2H8g26327 | 8:1,625,647-1,626,728 | + | C1H8g29030 | CX8g050951 | LOC_Os08g04250 | Os08g0136800 | - | Detail |
| C2H8g03200 | 8:1,629,247-1,633,573 | + | C1H8g22196 | CX8g054821 | LOC_Os08g04270 | Os08g0137100 | FIE2, OsFIE2, FIE, OsWD40-153 | Detail |
| C2H8g16350 | 8:1,637,776-1,646,830 | + | C1H8g02892 | CX8g054821 | LOC_Os08g04280 | Os08g0137200 | - | Detail |
| C2H8g14171 | 8:1,649,183-1,653,670 | + | C1H8g22196 | CX8g054821 | LOC_Os08g04290 | Os08g0137250 | FIE1, OsFIE1, OsWD40-154, OsEnS-116 | Detail |
| C2H8g22747 | 8:1,657,437-1,661,274 | + | C1H8g02517 | CX8g054716 | LOC_Os08g04300 | Os08g0137300 | - | Detail |
| C2H8g19526 | 8:1,665,026-1,665,992 | + | C1H8g10770 | CX8g053613 | LOC_Os08g04310 | Os08g0137400 | - | Detail |
| C2H8g26675 | 8:1,670,230-1,670,917 | + | C1H8g16397 | CX8g053613 | LOC_Os08g04340 | Os08g0137800 | - | Detail |
| C2H8g27378 | 8:1,678,963-1,679,529 | + | C1H8g29123 | CX8g053613 | LOC_Os08g04350 | Os08g0137900 | - | Detail |
| C2H8g03326 | 8:1,682,303-1,682,890 | + | C1H8g08365 | CX8g053613 | LOC_Os08g04360 | Os08g0138100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |