| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17927 | 3:3,906,340-3,907,266 | + | C2H3g00273 | CX3g028411 | LOC_Os03g08660 | Os03g0185000 | OsSAT2;1 | Detail |
| C1H3g12755 | 3:3,913,491-3,917,007 | - | C2H3g11839 | CX3g025419 | LOC_Os03g08680 | Os03g0185200 | - | Detail |
| C1H3g28231 | 3:3,920,806-3,921,966 | - | C2H3g29116 | CX3g025760 | LOC_Os03g08690 | Os03g0185400 | - | Detail |
| C1H3g00405 | 3:3,922,008-3,922,334 | - | C2H3g20267 | CX3g025419 | LOC_Os03g08680 | Os03g0185200 | - | Detail |
| C1H3g23204 | 3:3,924,070-3,930,584 | + | C2H3g02824 | CX3g030578 | LOC_Os03g08700 | Os03g0185500 | - | Detail |
| C1H3g14315 | 3:3,931,053-3,931,430 | + | C2H3g03896 | CX3g029404 | LOC_Os03g08710 | Os03g0185600 | - | Detail |
| C1H3g08110 | 3:3,933,849-3,935,207 | - | C2H3g03932 | CX3g029210 | LOC_Os03g08720 | Os03g0185700 | - | Detail |
| C1H3g08230 | 3:3,937,303-3,941,289 | + | C2H3g26196 | CX3g028148 | LOC_Os03g08730 | Os03g0186100 | - | Detail |
| C1H3g25573 | 3:3,954,427-3,959,552 | + | C2H3g17224 | CX3g031324 | LOC_Os03g08740 | Os03g0186500 | - | Detail |
| C1H3g14880 | 3:3,960,777-3,962,645 | - | C2H3g18825 | CX3g029023 | LOC_Os03g08754 | Os03g0186600 | OsMDP1, OsMADS47 | Detail |
| C1H3g19276 | 3:3,966,489-3,967,313 | - | C2H3g02473 | CX3g029023 | LOC_Os03g08754 | Os03g0186600 | OsMDP1, OsMADS47 | Detail |
| C1H3g04910 | 3:3,972,864-3,976,511 | + | C2H3g28859 | CX3g029172 | LOC_Os03g08770 | Os03g0186800 | - | Detail |
| C1H3g01713 | 3:3,981,399-3,982,721 | + | C2H3g12420 | CX3g026841 | LOC_Os03g08790 | Os03g0186900 | OsAP25 | Detail |
| C1H3g01138 | 3:3,983,504-3,985,286 | - | C2H3g16083 | CX3g028992 | LOC_Os03g08800 | Os03g0186950 | - | Detail |
| C1H3g25676 | 3:3,985,547-3,987,944 | + | C2H3g01321 | CX3g028590 | LOC_Os03g08810 | Os03g0187000 | - | Detail |
| C1H3g24115 | 3:3,992,222-4,001,378 | + | C2H3g18803 | CX3g028907 | LOC_Os03g08820 | Os03g0187100 | - | Detail |
| C1H3g08043 | 3:4,002,500-4,011,067 | + | C2H3g23594 | CX3g027040 | LOC_Os03g08830 | Os03g0187300 | - | Detail |
| C1H3g17315 | 3:4,011,333-4,011,896 | - | C2H3g16918 | - | LOC_Os03g08834 | Os03g0187350 | - | Detail |
| C1H3g31610 | 3:4,014,728-4,017,165 | + | C2H3g02517 | CX3g027060 | LOC_Os03g08840 | Os03g0187400 | - | Detail |
| C1H3g08919 | 3:4,025,767-4,028,539 | - | C2H3g15703 | CX3g030287 | LOC_Os03g08850 | Os03g0187500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g05814 | 10:19,340,934-19,343,250 | + | C1H10g24175 | CX10g009738 | LOC_Os10g39840 | Os10g0545500 | - | Detail |
| C2H10g14844 | 10:19,343,716-19,348,379 | - | C1H10g13577 | CX10g008172 | LOC_Os10g39850 | Os10g0545600 | - | Detail |
| C2H10g24798 | 10:19,349,207-19,351,138 | + | C1H10g13418 | CX10g010469 | LOC_Os10g39860 | Os10g0545700 | ACR2.1, OsACR2.1, CDC25.1, OsStr20 | Detail |
| C2H10g12311 | 10:19,353,973-19,354,770 | + | C1H10g14742 | CX10g009885 | LOC_Os10g39870 | Os10g0545800 | - | Detail |
| C2H10g27517 | 10:19,357,532-19,358,652 | + | C1H10g20935 | CX10g009616 | LOC_Os10g39890 | Os10g0546100 | - | Detail |
| C2H10g01701 | 10:19,360,069-19,367,331 | + | C1H10g00272 | CX10g009134 | LOC_Os10g39900 | Os10g0546200 | - | Detail |
| C2H10g23017 | 10:19,370,234-19,379,335 | + | C1H10g04018 | CX10g009883 | LOC_Os10g39910 | Os10g0546300 | - | Detail |
| C2H10g14373 | 10:19,380,947-19,381,324 | - | C1H3g00509 | CX10g008515 | LOC_Os10g39920 | Os10g0546400 | SMR1 | Detail |
| C2H10g19209 | 10:19,386,550-19,391,393 | + | C1H10g10076 | CX10g009273 | LOC_Os10g39930 | Os10g0546600 | - | Detail |
| C2H10g28599 | 10:19,400,943-19,401,638 | + | C1H10g28982 | CX10g009092 | LOC_Os10g39936 | Os10g0546900 | - | Detail |
| C2H10g02665 | 10:19,402,988-19,413,229 | - | C1H10g25210 | CX10g010451 | LOC_Os10g39950 | Os10g0547000 | - | Detail |
| C2H10g27212 | 10:19,419,423-19,420,067 | - | - | CX10g008083 | LOC_Os10g39970 | Os10g0547200 | - | Detail |
| C2H10g04053 | 10:19,427,288-19,429,588 | + | C1H10g00072 | CX10g009025 | LOC_Os10g39980 | Os10g0547500 | Lsi3, Lsi3/SIET2 | Detail |
| C2H10g07084 | 10:19,434,776-19,436,044 | - | C1H10g06775 | CX10g010516 | LOC_Os10g39990 | Os10g0547900 | - | Detail |
| C2H10g07034 | 10:19,436,234-19,441,893 | - | C1H10g28710 | CX10g010516 | LOC_Os10g40020 | Os10g0547900 | - | Detail |
| C2H10g27790 | 10:19,442,979-19,448,176 | - | C1H10g23409 | CX10g010516 | LOC_Os10g40020 | Os10g0547900 | - | Detail |
| C2H10g03687 | 10:19,449,894-19,454,796 | - | C1H10g25961 | CX10g010516 | LOC_Os10g40020 | Os10g0547900 | - | Detail |
| C2H10g19633 | 10:19,455,655-19,456,488 | - | - | CX10g008183 | LOC_Os10g40040 | Os10g0548100 | - | Detail |
| C2H10g24135 | 10:19,459,136-19,466,904 | - | C1H10g09352 | CX10g008258 | - | Os10g0548200 | - | Detail |
| C2H10g28350 | 10:19,467,399-19,472,037 | - | C1H10g06934 | CX10g010839 | LOC_Os10g40060 | Os10g0548300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |