| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g12084 | 3:3,779,736-3,782,943 | - | C2H3g02721 | CX3g026547 | LOC_Os03g08450 | Os03g0182700 | - | Detail |
| C1H3g13610 | 3:3,784,188-3,786,284 | - | C2H3g09094 | CX3g030128 | LOC_Os03g08460 | Os03g0182800 | OsEBP89 | Detail |
| C1H3g04941 | 3:3,789,437-3,791,231 | - | C2H3g06008 | CX3g031280 | LOC_Os03g08470 | Os03g0183000 | - | Detail |
| C1H3g08056 | 3:3,797,172-3,802,194 | - | C2H3g02534 | - | LOC_Os03g08480 | Os03g0183100 | - | Detail |
| C1H3g18658 | 3:3,805,932-3,806,924 | - | C2H3g29975 | CX3g030128 | LOC_Os03g08490 | Os03g0183200 | - | Detail |
| C1H3g12179 | 3:3,812,565-3,813,548 | - | C2H3g00824 | CX3g030128 | LOC_Os03g08500 | Os03g0183300 | - | Detail |
| C1H3g30663 | 3:3,819,829-3,820,478 | - | C2H3g15819 | CX3g025492 | LOC_Os03g08520 | Os03g0183500 | OsFLZ10 | Detail |
| C1H3g23856 | 3:3,825,399-3,829,119 | - | C2H3g03642 | CX3g025720 | LOC_Os03g08530 | Os03g0183600 | - | Detail |
| C1H3g10815 | 3:3,832,544-3,833,347 | + | C2H3g13760 | CX3g029852 | LOC_Os03g08540 | - | - | Detail |
| C1H3g04182 | 3:3,836,467-3,842,289 | + | C2H3g04585 | CX3g027473 | LOC_Os03g08550 | Os03g0183800 | - | Detail |
| C1H3g04928 | 3:3,842,419-3,847,540 | - | C2H3g01686 | CX3g025762 | LOC_Os03g08560 | Os03g0183900 | - | Detail |
| C1H3g17401 | 3:3,848,469-3,854,711 | + | C2H3g25647 | CX3g029574 | LOC_Os03g08570 | Os03g0184000 | OsPDS | Detail |
| C1H3g08309 | 3:3,857,455-3,859,933 | + | C2H3g01940 | CX3g027873 | LOC_Os03g08580 | Os03g0184100 | - | Detail |
| C1H3g03640 | 3:3,868,091-3,873,683 | + | C2H3g15817 | CX3g027355 | LOC_Os03g08600 | Os03g0184300 | - | Detail |
| C1H3g13079 | 3:3,878,027-3,880,825 | + | C2H3g27030 | CX3g026692 | LOC_Os03g08610 | Os03g0184400 | - | Detail |
| C1H3g25725 | 3:3,881,446-3,883,046 | - | C2H3g00042 | CX3g031066 | LOC_Os03g08620 | Os03g0184500 | - | Detail |
| C1H3g19327 | 3:3,884,455-3,886,321 | + | C2H3g00164 | CX3g030436 | LOC_Os03g08624 | Os03g0184550 | - | Detail |
| C1H3g17870 | 3:3,890,192-3,892,381 | + | C2H3g00164 | CX3g025220 | LOC_Os03g08630 | Os03g0184600 | - | Detail |
| C1H3g06804 | 3:3,892,956-3,894,987 | - | C2H3g20986 | CX3g028169 | LOC_Os03g08640 | Os03g0184700 | OsORC2 | Detail |
| C1H3g20941 | 3:3,896,250-3,897,694 | - | - | CX3g031060 | - | Os04g0581502 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g30159 | 8:20,180,934-20,184,912 | + | C1H8g14517 | CX8g051178 | LOC_Os08g37605 | Os08g0481950 | - | Detail |
| C2H8g15130 | 8:20,185,845-20,196,202 | + | C1H8g07211 | CX8g052811 | LOC_Os08g37610 | Os08g0482100 | - | Detail |
| C2H8g13041 | 8:20,198,337-20,200,214 | - | - | - | LOC_Os08g37640 | - | - | Detail |
| C2H8g06375 | 8:20,198,476-20,198,913 | + | - | CX8g054531 | LOC_Os08g37630 | Os08g0482300 | - | Detail |
| C2H8g27335 | 8:20,201,112-20,201,683 | - | C1H8g13674 | CX8g051502 | LOC_Os08g37650 | Os08g0482500 | - | Detail |
| C2H8g01786 | 8:20,204,234-20,204,901 | - | C1H8g22517 | CX8g054566 | LOC_Os08g37660 | Os08g0482600 | - | Detail |
| C2H8g26304 | 8:20,209,551-20,210,954 | - | C1H8g26612 | CX8g051771 | LOC_Os08g37670 | Os08g0482700 | - | Detail |
| C2H8g12612 | 8:20,222,740-20,223,522 | - | C1H8g19088 | CX8g054519 | LOC_Os08g37690 | Os08g0483100 | - | Detail |
| C2H8g09038 | 8:20,223,756-20,229,073 | - | C1H8g21916 | CX8g052700 | LOC_Os08g37700 | Os08g0483200 | - | Detail |
| C2H8g27109 | 8:20,232,352-20,234,795 | - | C1H8g05510 | CX8g050983 | LOC_Os08g37720 | Os08g0483600 | - | Detail |
| C2H8g23437 | 8:20,242,436-20,244,265 | - | C1H8g11574 | CX8g053834 | LOC_Os08g37730 | Os08g0483900 | - | Detail |
| C2H8g13774 | 8:20,254,722-20,255,276 | + | C1H8g09476 | CX8g054153 | LOC_Os08g37750 | Os08g0484100 | - | Detail |
| C2H8g25738 | 8:20,256,457-20,258,479 | + | C1H8g15896 | CX8g054153 | LOC_Os08g37750 | - | - | Detail |
| C2H8g13904 | 8:20,262,259-20,263,515 | + | C1H8g09056 | CX8g053214 | LOC_Os08g37760 | Os08g0484200 | - | Detail |
| C2H8g15402 | 8:20,265,035-20,265,346 | - | C1H3g15090 | CX3g028977 | LOC_Os03g51510 | Os08g0484301 | OsRpl6-2 | Detail |
| C2H8g07782 | 8:20,268,617-20,275,829 | - | C1H8g11144 | CX8g052694 | LOC_Os08g37780 | Os08g0484400 | - | Detail |
| C2H8g28642 | 8:20,276,764-20,280,012 | - | C1H8g28521 | CX8g050930 | LOC_Os08g37790 | Os08g0484500 | - | Detail |
| C2H8g02027 | 8:20,282,838-20,283,137 | - | - | CX8g054447 | - | - | - | Detail |
| C2H8g04029 | 8:20,282,856-20,287,955 | + | C1H8g08760 | CX8g053838 | LOC_Os08g37800 | Os08g0484600 | OSK4, osk4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK4 | Detail |
| C2H8g23842 | 8:20,290,737-20,291,705 | + | - | - | LOC_Os08g37810 | Os08g0484700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |