| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g12084 | 3:3,779,736-3,782,943 | - | C2H3g02721 | CX3g026547 | LOC_Os03g08450 | Os03g0182700 | - | Detail |
| C1H3g13610 | 3:3,784,188-3,786,284 | - | C2H3g09094 | CX3g030128 | LOC_Os03g08460 | Os03g0182800 | OsEBP89 | Detail |
| C1H3g04941 | 3:3,789,437-3,791,231 | - | C2H3g06008 | CX3g031280 | LOC_Os03g08470 | Os03g0183000 | - | Detail |
| C1H3g08056 | 3:3,797,172-3,802,194 | - | C2H3g02534 | - | LOC_Os03g08480 | Os03g0183100 | - | Detail |
| C1H3g18658 | 3:3,805,932-3,806,924 | - | C2H3g29975 | CX3g030128 | LOC_Os03g08490 | Os03g0183200 | - | Detail |
| C1H3g12179 | 3:3,812,565-3,813,548 | - | C2H3g00824 | CX3g030128 | LOC_Os03g08500 | Os03g0183300 | - | Detail |
| C1H3g30663 | 3:3,819,829-3,820,478 | - | C2H3g15819 | CX3g025492 | LOC_Os03g08520 | Os03g0183500 | OsFLZ10 | Detail |
| C1H3g23856 | 3:3,825,399-3,829,119 | - | C2H3g03642 | CX3g025720 | LOC_Os03g08530 | Os03g0183600 | - | Detail |
| C1H3g10815 | 3:3,832,544-3,833,347 | + | C2H3g13760 | CX3g029852 | LOC_Os03g08540 | - | - | Detail |
| C1H3g04182 | 3:3,836,467-3,842,289 | + | C2H3g04585 | CX3g027473 | LOC_Os03g08550 | Os03g0183800 | - | Detail |
| C1H3g04928 | 3:3,842,419-3,847,540 | - | C2H3g01686 | CX3g025762 | LOC_Os03g08560 | Os03g0183900 | - | Detail |
| C1H3g17401 | 3:3,848,469-3,854,711 | + | C2H3g25647 | CX3g029574 | LOC_Os03g08570 | Os03g0184000 | OsPDS | Detail |
| C1H3g08309 | 3:3,857,455-3,859,933 | + | C2H3g01940 | CX3g027873 | LOC_Os03g08580 | Os03g0184100 | - | Detail |
| C1H3g03640 | 3:3,868,091-3,873,683 | + | C2H3g15817 | CX3g027355 | LOC_Os03g08600 | Os03g0184300 | - | Detail |
| C1H3g13079 | 3:3,878,027-3,880,825 | + | C2H3g27030 | CX3g026692 | LOC_Os03g08610 | Os03g0184400 | - | Detail |
| C1H3g25725 | 3:3,881,446-3,883,046 | - | C2H3g00042 | CX3g031066 | LOC_Os03g08620 | Os03g0184500 | - | Detail |
| C1H3g19327 | 3:3,884,455-3,886,321 | + | C2H3g00164 | CX3g030436 | LOC_Os03g08624 | Os03g0184550 | - | Detail |
| C1H3g17870 | 3:3,890,192-3,892,381 | + | C2H3g00164 | CX3g025220 | LOC_Os03g08630 | Os03g0184600 | - | Detail |
| C1H3g06804 | 3:3,892,956-3,894,987 | - | C2H3g20986 | CX3g028169 | LOC_Os03g08640 | Os03g0184700 | OsORC2 | Detail |
| C1H3g20941 | 3:3,896,250-3,897,694 | - | - | CX3g031060 | - | Os04g0581502 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g05381 | 8:4,590,104-4,590,979 | - | C1H8g25080 | CX8g054585 | LOC_Os08g09470 | Os08g0195000 | - | Detail |
| C2H8g30449 | 8:4,607,436-4,612,745 | - | C1H8g17322 | CX8g050571 | LOC_Os08g09580 | Os08g0194350 | - | Detail |
| C2H8g26516 | 8:4,622,236-4,636,473 | + | C1H8g21908 | CX8g052446 | LOC_Os08g09570 | Os08g0194900 | - | Detail |
| C2H8g12506 | 8:4,640,785-4,643,199 | + | C1H8g14744 | CX8g054585 | LOC_Os08g09590 | Os08g0195000 | - | Detail |
| C2H8g08097 | 8:4,648,381-4,650,388 | + | C1H8g05844 | CX8g050571 | LOC_Os08g09600 | Os08g0194350 | - | Detail |
| C2H8g09708 | 8:4,655,823-4,656,232 | - | C1H8g16197 | CX8g050681 | LOC_Os08g09450 | Os08g0193900 | - | Detail |
| C2H8g23903 | 8:4,657,246-4,657,912 | - | C1H8g07536 | - | - | Os08g0195650 | - | Detail |
| C2H8g03299 | 8:4,659,834-4,662,184 | - | C1H8g16658 | CX8g050681 | LOC_Os08g09640 | Os08g0195800 | - | Detail |
| C2H8g01100 | 8:4,664,267-4,666,454 | - | C1H8g01333 | CX8g050681 | LOC_Os08g09650 | Os08g0195900 | - | Detail |
| C2H8g22886 | 8:4,672,876-4,673,640 | - | C1H8g23963 | CX8g050681 | LOC_Os08g09670 | Os08g0196200 | - | Detail |
| C2H8g06427 | 8:4,674,913-4,675,299 | - | C1H8g23963 | CX8g050681 | LOC_Os08g09450 | Os08g0196200 | - | Detail |
| C2H8g05638 | 8:4,688,573-4,690,756 | - | C1H8g29759 | CX8g050681 | LOC_Os08g09670 | Os08g0193900 | - | Detail |
| C2H8g18046 | 8:4,720,777-4,722,610 | + | C1H8g12615 | CX8g054571 | LOC_Os08g09690 | Os08g0196700 | HAP2A, OsHAP2A, NF-YA, CBF-B, NF-YA7, OsNF-YA7 | Detail |
| C2H8g26443 | 8:4,724,495-4,729,168 | + | C1H8g03144 | CX8g052261 | LOC_Os08g09700 | Os08g0196900 | - | Detail |
| C2H8g28092 | 8:4,732,763-4,736,876 | + | C1H8g22473 | CX8g051043 | LOC_Os08g09710 | Os08g0197000 | - | Detail |
| C2H8g03656 | 8:4,738,508-4,741,177 | + | C1H8g20382 | CX8g051043 | LOC_Os08g09715 | Os08g0197050 | - | Detail |
| C2H8g08254 | 8:4,742,498-4,745,421 | + | C1H8g01088 | CX8g051043 | LOC_Os08g09720 | Os08g0197100 | - | Detail |
| C2H8g05630 | 8:4,748,582-4,751,076 | + | C1H8g12345 | CX8g051043 | LOC_Os08g09730 | Os08g0197050 | - | Detail |
| C2H8g17479 | 8:4,753,628-4,756,951 | + | C1H8g03261 | CX8g051012 | LOC_Os08g09740 | Os08g0197300 | - | Detail |
| C2H8g10477 | 8:4,758,094-4,760,595 | + | C1H8g00163 | CX8g051012 | LOC_Os08g09750 | Os08g0197400 | FB3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |