| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g18624 | 3:3,170,502-3,171,484 | + | C2H3g13511 | CX10g008216 | LOC_Os10g27174 | Os10g0411700 | - | Detail |
| C1H3g05997 | 3:3,171,631-3,175,957 | - | C2H3g27991 | CX3g025455 | LOC_Os03g07110 | Os03g0167200 | OsIQM2 | Detail |
| C1H3g25407 | 3:3,178,910-3,182,806 | + | C2H3g02351 | CX3g027989 | LOC_Os03g07120 | Os03g0167400 | - | Detail |
| C1H3g07433 | 3:3,188,091-3,193,053 | + | C2H3g10661 | CX3g026239 | LOC_Os03g07130 | Os03g0167500 | OsRMR3, OsRMR1, RMR1 | Detail |
| C1H3g28690 | 3:3,195,520-3,198,425 | + | C2H3g14503 | CX3g025251 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| C1H3g18783 | 3:3,198,743-3,203,341 | - | C2H3g20508 | CX3g030776 | LOC_Os03g07150 | Os03g0167700 | OsPP2A-5 | Detail |
| C1H3g01595 | 3:3,205,232-3,210,120 | + | C2H3g28397 | CX3g026055 | LOC_Os03g07160 | Os03g0167800 | - | Detail |
| C1H3g17186 | 3:3,215,481-3,218,315 | + | C2H3g21676 | CX3g029636 | LOC_Os03g07170 | Os03g0168000 | - | Detail |
| C1H3g09927 | 3:3,218,887-3,220,221 | - | C2H3g13648 | CX3g029073 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| C1H3g29196 | 3:3,221,920-3,223,702 | + | C2H3g15532 | CX3g027260 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| C1H3g00563 | 3:3,224,170-3,225,761 | - | C2H3g27665 | CX3g028572 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| C1H3g28864 | 3:3,228,954-3,235,173 | + | C2H3g04176 | CX3g029392 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| C1H3g15091 | 3:3,235,444-3,237,125 | - | C2H3g16262 | CX3g030074 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| C1H3g30181 | 3:3,240,661-3,242,295 | - | C2H3g22195 | CX3g027344 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| C1H3g19869 | 3:3,244,499-3,246,430 | - | C2H3g27571 | CX3g025173 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| C1H3g04648 | 3:3,247,542-3,249,149 | - | C2H3g09688 | CX3g027461 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| C1H3g06973 | 3:3,250,126-3,250,332 | + | C2H3g10633 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C1H3g26589 | 3:3,250,415-3,251,928 | + | C2H3g26226 | CX3g029686 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| C1H3g22339 | 3:3,252,878-3,256,211 | + | C2H3g29541 | CX3g029329 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| C1H3g05071 | 3:3,256,819-3,260,065 | - | C2H3g19913 | CX3g026826 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g18354 | 6:26,466,626-26,469,084 | + | C1H6g17682 | CX6g042918 | LOC_Os06g49670 | Os06g0710800 | OsSLC1 | Detail |
| C2H6g04422 | 6:26,472,997-26,473,830 | - | C1H6g11722 | CX6g041310 | LOC_Os06g49690 | Os06g0711000 | - | Detail |
| C2H6g25646 | 6:26,476,331-26,479,653 | + | C1H6g16460 | CX6g042570 | LOC_Os06g49700 | Os06g0711100 | - | Detail |
| C2H6g10043 | 6:26,481,621-26,481,935 | + | C1H6g15279 | CX6g045599 | LOC_Os06g49710 | Os06g0711200 | - | Detail |
| C2H6g23650 | 6:26,483,995-26,486,085 | + | C1H6g09367 | CX6g045599 | LOC_Os06g49740 | Os06g0711600 | - | Detail |
| C2H6g25880 | 6:26,513,491-26,514,765 | + | C1H6g29005 | CX6g044178 | LOC_Os06g49770 | Os06g0711900 | - | Detail |
| C2H6g25410 | 6:26,515,517-26,516,239 | + | C1H6g26906 | CX6g042719 | LOC_Os06g49780 | Os06g0712200 | - | Detail |
| C2H6g17872 | 6:26,520,803-26,526,053 | + | C1H6g13114 | CX6g045719 | LOC_Os06g49790 | Os06g0712300 | - | Detail |
| C2H6g14735 | 6:26,526,285-26,532,210 | - | C1H6g03875 | CX6g043609 | LOC_Os06g49800 | Os06g0712400 | - | Detail |
| C2H6g30105 | 6:26,537,107-26,541,028 | + | C1H6g12321 | CX6g045505 | LOC_Os06g49810 | Os06g0712500 | - | Detail |
| C2H6g04779 | 6:26,570,660-26,573,622 | - | C1H6g15822 | CX6g042882 | LOC_Os06g49840 | Os06g0712700 | SPW1, spw1, MADS16, OsMADS16 | Detail |
| C2H6g23224 | 6:26,573,774-26,574,420 | - | C1H6g30018 | CX6g042882 | LOC_Os06g49840 | Os06g0712700 | SPW1, spw1, MADS16, OsMADS16 | Detail |
| C2H6g01728 | 6:26,579,245-26,581,724 | + | C1H6g23833 | CX6g041789 | LOC_Os06g49860 | Os06g0712800 | OsPMT16 | Detail |
| C2H6g13587 | 6:26,582,050-26,582,557 | + | C1H6g23833 | CX6g041789 | LOC_Os06g49860 | Os06g0687450 | - | Detail |
| C2H6g09917 | 6:26,584,866-26,586,677 | - | C1H6g00044 | CX6g042137 | LOC_Os06g49870 | Os06g0712900 | - | Detail |
| C2H6g23411 | 6:26,593,611-26,595,070 | + | C1H6g14044 | CX6g045047 | LOC_Os06g49880 | Os06g0713000 | - | Detail |
| C2H6g03582 | 6:26,602,278-26,606,446 | - | C1H6g05528 | CX6g041542 | LOC_Os06g49890 | Os06g0713100 | - | Detail |
| C2H6g04835 | 6:26,609,036-26,611,351 | + | C1H6g08844 | CX6g045577 | LOC_Os06g49920 | Os06g0713300 | - | Detail |
| C2H6g28383 | 6:26,612,972-26,619,406 | - | C1H6g21865 | CX6g043136 | LOC_Os06g49930 | Os06g0713400 | - | Detail |
| C2H6g28713 | 6:26,622,190-26,626,181 | - | C1H6g25348 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |