| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g12948 | 3:2,877,761-2,883,142 | - | C2H3g11481 | CX3g029615 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| C1H3g19950 | 3:2,894,688-2,897,060 | + | C2H3g04338 | CX3g031150 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| C1H3g16884 | 3:2,904,785-2,907,181 | + | C2H3g04897 | CX3g029485 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| C1H3g31680 | 3:2,912,540-2,913,001 | - | C2H3g20671 | CX3g029738 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| C1H3g19723 | 3:2,928,792-2,930,967 | + | C2H3g16543 | CX3g029835 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| C1H3g17239 | 3:2,932,524-2,934,738 | + | C2H3g18983 | CX3g029527 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C1H3g19807 | 3:2,946,701-2,949,199 | + | C2H3g18217 | CX3g030288 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| C1H3g07386 | 3:2,960,172-2,960,742 | + | C2H3g01853 | CX3g030521 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| C1H3g24759 | 3:2,968,215-2,969,716 | + | C2H3g21314 | CX3g025819 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| C1H3g16348 | 3:2,986,722-2,991,271 | + | C2H3g14410 | CX3g029826 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| C1H3g31273 | 3:2,991,976-2,995,226 | + | C2H3g28634 | - | - | - | - | Detail |
| C1H3g04672 | 3:2,998,751-3,000,234 | + | C2H3g03063 | - | - | Os03g0163000 | - | Detail |
| C1H3g10390 | 3:3,001,288-3,008,868 | + | C2H3g15393 | CX3g025042 | LOC_Os03g06720 | Os03g0163100 | - | Detail |
| C1H3g23541 | 3:3,009,056-3,010,541 | + | C2H3g06714 | CX3g025042 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| C1H3g17347 | 3:3,011,437-3,016,143 | + | C2H3g22693 | CX3g026090 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| C1H3g06657 | 3:3,016,729-3,017,562 | - | C2H3g01887 | CX3g029299 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| C1H3g03297 | 3:3,020,523-3,022,889 | + | C2H3g29355 | CX3g026455 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| C1H3g08120 | 3:3,028,406-3,028,651 | - | C2H3g28597 | - | LOC_Os03g06790 | Os03g0163600 | - | Detail |
| C1H3g17320 | 3:3,033,403-3,034,251 | - | C2H3g28597 | - | LOC_Os03g06790 | Os03g0163600 | - | Detail |
| C1H3g31538 | 3:3,051,875-3,054,321 | + | C2H3g08001 | CX3g031186 | LOC_Os03g06880 | Os03g0164700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g21379 | 7:22,933,425-22,936,325 | - | C1H7g01738 | CX7g047768 | LOC_Os07g46520 | Os07g0659400 | - | Detail |
| C2H7g03403 | 7:22,940,004-22,950,333 | - | C1H7g10347 | CX7g046781 | LOC_Os07g46540 | Os07g0659500 | - | Detail |
| C2H7g10112 | 7:22,951,395-22,953,216 | - | C1H7g02083 | CX7g048030 | LOC_Os07g46550 | Os07g0659600 | OsANN3 | Detail |
| C2H7g06360 | 7:22,954,307-22,956,329 | + | C1H7g26402 | CX7g048452 | LOC_Os07g46555 | Os07g0659700 | - | Detail |
| C2H7g26445 | 7:22,964,138-22,965,727 | + | C1H7g23597 | CX7g046966 | LOC_Os07g46560 | Os07g0659800 | RIP6 | Detail |
| C2H7g18459 | 7:22,974,056-22,979,633 | + | C1H7g30486 | CX7g046205 | LOC_Os07g46580 | Os07g0660000 | - | Detail |
| C2H7g00394 | 7:22,981,899-22,995,134 | - | C1H7g14415 | CX7g049237 | LOC_Os07g46590 | Os07g0660200 | OsCHR705, CHR705 | Detail |
| C2H7g06297 | 7:22,996,927-23,000,848 | - | C1H7g19507 | CX7g047918 | LOC_Os07g46600 | Os07g0660400 | - | Detail |
| C2H7g20944 | 7:23,006,660-23,010,677 | + | C1H7g26558 | CX7g049118 | LOC_Os07g46620 | Os07g0660700 | - | Detail |
| C2H7g20878 | 7:23,016,882-23,020,269 | + | C1H7g31070 | CX7g048413 | LOC_Os07g46630 | Os07g0661000 | - | Detail |
| C2H7g17387 | 7:23,021,282-23,026,706 | - | C1H7g11539 | CX7g049936 | LOC_Os07g46640 | Os07g0661100 | - | Detail |
| C2H7g04292 | 7:23,029,063-23,033,683 | + | C1H7g09836 | CX7g049361 | LOC_Os07g46660 | Os07g0661300 | - | Detail |
| C2H7g28849 | 7:23,048,162-23,058,419 | - | C1H7g29470 | CX7g046475 | LOC_Os07g46690 | Os07g0661550 | - | Detail |
| C2H7g15671 | 7:23,062,267-23,067,936 | - | C1H7g22133 | CX7g049623 | LOC_Os07g46700 | Os07g0661600 | - | Detail |
| C2H7g03796 | 7:23,069,948-23,071,328 | - | C1H7g13026 | CX7g049782 | LOC_Os07g46710 | Os07g0661700 | - | Detail |
| C2H7g30246 | 7:23,078,244-23,081,529 | - | C1H7g10838 | CX7g050209 | LOC_Os07g46730 | Os07g0661900 | - | Detail |
| C2H7g27930 | 7:23,085,056-23,087,418 | + | C1H7g08630 | CX7g046287 | LOC_Os07g46750 | Os07g0662500 | - | Detail |
| C2H7g29239 | 7:23,088,377-23,090,818 | + | C1H7g11410 | CX7g046845 | LOC_Os07g46760 | Os07g0662600 | - | Detail |
| C2H7g15594 | 7:23,092,031-23,098,469 | + | C1H7g20986 | CX7g049649 | LOC_Os07g46770 | Os07g0662700 | - | Detail |
| C2H7g13375 | 7:23,094,170-23,097,755 | - | C1H7g25333 | CX7g046471 | LOC_Os07g46780 | Os07g0225100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |