| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g11336 | 1:12,744,868-12,745,764 | - | C2H1g08931 | CX1g001694 | LOC_Os01g24820 | Os01g0350300 | - | Detail |
| C1H1g00555 | 1:12,780,209-12,787,876 | + | C2H1g21333 | CX1g002860 | LOC_Os01g24880 | Os01g0350900 | IPI1 | Detail |
| C1H1g05982 | 1:12,795,921-12,802,116 | + | C2H1g14607 | CX1g005272 | LOC_Os01g24940 | Os01g0351100 | - | Detail |
| C1H1g06101 | 1:12,810,973-12,818,003 | + | C2H1g09806 | CX1g000433 | LOC_Os01g24940 | Os01g0351200 | - | Detail |
| C1H1g24498 | 1:12,825,113-12,828,752 | - | C2H1g18699 | CX1g006080 | LOC_Os01g24960 | Os01g0351500 | - | Detail |
| C1H1g12342 | 1:12,834,829-12,837,777 | + | C2H1g23303 | CX1g002020 | LOC_Os01g24980 | Os01g0351800 | - | Detail |
| C1H1g19518 | 1:12,842,812-12,846,024 | + | C2H1g18138 | CX1g002475 | LOC_Os01g25010 | Os01g0352100 | - | Detail |
| C1H1g19827 | 1:12,863,034-12,863,307 | + | C2H1g07713 | CX1g006850 | - | - | - | Detail |
| C1H1g16000 | 1:12,892,251-12,893,187 | + | C2H1g07698 | CX1g003259 | LOC_Os01g25100 | Os01g0353400 | OsGST4 | Detail |
| C1H1g26956 | 1:12,897,173-12,900,081 | + | C2H1g26082 | CX1g006645 | LOC_Os01g25110 | Os01g0353600 | - | Detail |
| C1H1g21653 | 1:12,947,774-12,948,316 | - | C2H1g28232 | CX1g000417 | LOC_Os01g25160 | Os01g0348900 | OsJRL, OsMBL1, OsSalt | Detail |
| C1H1g17593 | 1:12,953,647-12,955,271 | - | C2H1g28563 | CX1g005641 | LOC_Os03g29584 | Os03g0409600 | - | Detail |
| C1H1g31563 | 1:12,956,258-12,965,423 | - | C2H1g15011 | CX1g006951 | LOC_Os01g25189 | Os01g0354200 | - | Detail |
| C1H1g07040 | 1:12,974,443-12,978,461 | + | C2H1g21879 | CX1g002132 | LOC_Os01g25240 | Os01g0354700 | - | Detail |
| C1H1g01971 | 1:13,011,704-13,012,746 | - | - | CX1g003993 | - | - | - | Detail |
| C1H1g30039 | 1:13,033,815-13,034,787 | + | C2H1g17996 | CX1g000600 | LOC_Os01g27580 | Os01g0872900 | - | Detail |
| C1H1g26223 | 1:13,041,692-13,053,739 | - | C2H1g16578 | CX1g005915 | LOC_Os01g25320 | Os01g0355500 | - | Detail |
| C1H1g04484 | 1:13,054,602-13,055,465 | + | C2H1g00764 | CX1g003598 | - | - | - | Detail |
| C1H1g04297 | 1:13,062,797-13,073,588 | + | C2H1g03083 | CX1g006277 | LOC_Os01g25330 | Os01g0355600 | - | Detail |
| C1H1g19528 | 1:13,091,318-13,095,934 | - | C2H1g27635 | CX1g006683 | LOC_Os01g25370 | Os01g0355900 | OsELS1, OsELS1.3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g05814 | 10:19,340,934-19,343,250 | + | C1H10g24175 | CX10g009738 | LOC_Os10g39840 | Os10g0545500 | - | Detail |
| C2H10g14844 | 10:19,343,716-19,348,379 | - | C1H10g13577 | CX10g008172 | LOC_Os10g39850 | Os10g0545600 | - | Detail |
| C2H10g24798 | 10:19,349,207-19,351,138 | + | C1H10g13418 | CX10g010469 | LOC_Os10g39860 | Os10g0545700 | ACR2.1, OsACR2.1, CDC25.1, OsStr20 | Detail |
| C2H10g12311 | 10:19,353,973-19,354,770 | + | C1H10g14742 | CX10g009885 | LOC_Os10g39870 | Os10g0545800 | - | Detail |
| C2H10g27517 | 10:19,357,532-19,358,652 | + | C1H10g20935 | CX10g009616 | LOC_Os10g39890 | Os10g0546100 | - | Detail |
| C2H10g01701 | 10:19,360,069-19,367,331 | + | C1H10g00272 | CX10g009134 | LOC_Os10g39900 | Os10g0546200 | - | Detail |
| C2H10g23017 | 10:19,370,234-19,379,335 | + | C1H10g04018 | CX10g009883 | LOC_Os10g39910 | Os10g0546300 | - | Detail |
| C2H10g14373 | 10:19,380,947-19,381,324 | - | C1H3g00509 | CX10g008515 | LOC_Os10g39920 | Os10g0546400 | SMR1 | Detail |
| C2H10g19209 | 10:19,386,550-19,391,393 | + | C1H10g10076 | CX10g009273 | LOC_Os10g39930 | Os10g0546600 | - | Detail |
| C2H10g28599 | 10:19,400,943-19,401,638 | + | C1H10g28982 | CX10g009092 | LOC_Os10g39936 | Os10g0546900 | - | Detail |
| C2H10g02665 | 10:19,402,988-19,413,229 | - | C1H10g25210 | CX10g010451 | LOC_Os10g39950 | Os10g0547000 | - | Detail |
| C2H10g27212 | 10:19,419,423-19,420,067 | - | - | CX10g008083 | LOC_Os10g39970 | Os10g0547200 | - | Detail |
| C2H10g04053 | 10:19,427,288-19,429,588 | + | C1H10g00072 | CX10g009025 | LOC_Os10g39980 | Os10g0547500 | Lsi3, Lsi3/SIET2 | Detail |
| C2H10g07084 | 10:19,434,776-19,436,044 | - | C1H10g06775 | CX10g010516 | LOC_Os10g39990 | Os10g0547900 | - | Detail |
| C2H10g07034 | 10:19,436,234-19,441,893 | - | C1H10g28710 | CX10g010516 | LOC_Os10g40020 | Os10g0547900 | - | Detail |
| C2H10g27790 | 10:19,442,979-19,448,176 | - | C1H10g23409 | CX10g010516 | LOC_Os10g40020 | Os10g0547900 | - | Detail |
| C2H10g03687 | 10:19,449,894-19,454,796 | - | C1H10g25961 | CX10g010516 | LOC_Os10g40020 | Os10g0547900 | - | Detail |
| C2H10g19633 | 10:19,455,655-19,456,488 | - | - | CX10g008183 | LOC_Os10g40040 | Os10g0548100 | - | Detail |
| C2H10g24135 | 10:19,459,136-19,466,904 | - | C1H10g09352 | CX10g008258 | - | Os10g0548200 | - | Detail |
| C2H10g28350 | 10:19,467,399-19,472,037 | - | C1H10g06934 | CX10g010839 | LOC_Os10g40060 | Os10g0548300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |