| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g17420 | 3:2,666,472-2,666,826 | + | - | - | - | - | - | Detail |
| C1H3g20866 | 3:2,666,499-2,667,605 | - | C2H3g02200 | CX3g030887 | LOC_Os03g06010 | Os03g0155500 | - | Detail |
| C1H3g11002 | 3:2,669,592-2,670,587 | - | C2H3g03476 | CX3g030887 | LOC_Os03g06020 | Os03g0155700 | - | Detail |
| C1H3g29148 | 3:2,676,998-2,678,029 | + | C2H3g21765 | CX3g026879 | LOC_Os03g06040 | Os03g0155900 | - | Detail |
| C1H3g13236 | 3:2,682,198-2,683,160 | + | C2H3g20541 | CX3g030616 | LOC_Os03g06050 | Os03g0156000 | - | Detail |
| C1H3g14896 | 3:2,686,814-2,688,159 | + | C2H3g21016 | CX3g030362 | LOC_Os03g06050 | Os03g0156000 | - | Detail |
| C1H3g22589 | 3:2,691,408-2,697,051 | + | C2H3g26202 | CX3g028170 | LOC_Os03g06070 | Os03g0156500 | - | Detail |
| C1H3g15562 | 3:2,698,467-2,699,101 | - | C2H3g20735 | CX3g027145 | LOC_Os03g06080 | Os03g0156600 | OsHIPP41 | Detail |
| C1H3g17245 | 3:2,700,086-2,702,821 | - | C2H3g12120 | CX3g030214 | LOC_Os03g06090 | Os03g0156700 | OsZNL | Detail |
| C1H3g00011 | 3:2,709,970-2,715,165 | + | C2H3g09177 | CX3g027334 | LOC_Os03g06120 | Os03g0157300 | - | Detail |
| C1H3g18475 | 3:2,715,605-2,721,294 | - | C2H3g13704 | CX3g029328 | LOC_Os03g06139 | Os03g0157400 | - | Detail |
| C1H3g26244 | 3:2,727,449-2,731,247 | + | C2H3g27336 | CX3g029562 | LOC_Os03g06160 | Os03g0157500 | - | Detail |
| C1H3g25701 | 3:2,731,610-2,732,502 | - | C2H3g20862 | CX3g026857 | LOC_Os03g06170 | Os03g0157600 | - | Detail |
| C1H3g29213 | 3:2,733,962-2,736,526 | + | C2H3g00855 | CX3g027580 | LOC_Os03g06180 | Os03g0157700 | - | Detail |
| C1H3g13607 | 3:2,737,314-2,737,776 | + | C2H3g07970 | CX3g027580 | LOC_Os03g06180 | Os03g0157700 | - | Detail |
| C1H3g27937 | 3:2,739,692-2,745,752 | + | C2H3g02320 | CX3g029139 | LOC_Os03g06190 | Os03g0157800 | - | Detail |
| C1H3g17311 | 3:2,746,745-2,748,019 | + | C2H3g08121 | CX3g030066 | LOC_Os03g06200 | Os03g0157900 | - | Detail |
| C1H3g14244 | 3:2,750,230-2,754,831 | + | C2H3g26855 | CX3g027012 | LOC_Os03g06220 | Os03g0158200 | - | Detail |
| C1H3g30148 | 3:2,754,931-2,757,126 | - | C2H3g29839 | CX3g025660 | LOC_Os03g06230 | Os03g0158300 | - | Detail |
| C1H3g19490 | 3:2,758,799-2,763,080 | - | C2H3g19059 | CX3g029728 | LOC_Os03g06240 | Os03g0158500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g17731 | 1:11,049,940-11,051,270 | - | C1H1g15186 | CX1g006057 | LOC_Os01g22540 | Os01g0328300 | - | Detail |
| C2H1g07485 | 1:11,052,721-11,061,583 | - | C1H1g04469 | CX1g003742 | LOC_Os01g22550 | Os01g0328900 | - | Detail |
| C2H1g09100 | 1:11,075,824-11,086,816 | - | C1H1g05350 | CX1g005773 | LOC_Os01g22570 | Os01g0329000 | - | Detail |
| C2H1g11900 | 1:11,081,351-11,081,761 | + | C1H1g04414 | - | - | - | - | Detail |
| C2H1g09369 | 1:11,081,817-11,082,890 | + | C1H1g04414 | - | - | - | - | Detail |
| C2H1g05958 | 1:11,105,700-11,108,293 | + | C1H1g22940 | CX1g001596 | LOC_Os01g22590 | Os01g0329300 | - | Detail |
| C2H1g26866 | 1:11,108,646-11,114,727 | - | C1H1g12319 | CX1g000240 | LOC_Os01g22600 | Os01g0329400 | - | Detail |
| C2H1g27428 | 1:11,120,485-11,126,202 | + | C1H1g03998 | CX1g004633 | LOC_Os01g22630 | Os01g0329800 | - | Detail |
| C2H1g01944 | 1:11,129,768-11,133,185 | + | C1H1g12639 | CX1g006655 | LOC_Os01g22640 | Os01g0329900 | - | Detail |
| C2H1g06794 | 1:11,142,259-11,145,557 | + | C1H1g19397 | CX1g007268 | LOC_Os01g22660 | Os01g0330100 | - | Detail |
| C2H1g22823 | 1:11,145,602-11,147,126 | - | C1H1g03743 | CX1g006180 | LOC_Os01g22670 | Os01g0330200 | - | Detail |
| C2H1g15539 | 1:11,150,665-11,151,861 | + | C1H1g15782 | CX1g005713 | LOC_Os01g22680 | Os01g0347500 | - | Detail |
| C2H1g24217 | 1:11,187,471-11,187,848 | + | C1H1g14705 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C2H1g06111 | 1:11,191,186-11,192,642 | + | C1H1g09878 | CX1g004068 | LOC_Os01g22780 | Os01g0331100 | - | Detail |
| C2H1g00150 | 1:11,200,601-11,204,950 | + | C1H1g18229 | CX1g001443 | LOC_Os01g22870 | Os01g0331900 | - | Detail |
| C2H1g27905 | 1:11,215,583-11,219,624 | + | C1H1g29292 | CX1g005311 | LOC_Os01g22900 | Os01g0332100 | - | Detail |
| C2H1g02015 | 1:11,222,778-11,224,949 | - | C1H1g15812 | CX1g005606 | LOC_Os01g22910 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C2H1g12678 | 1:11,230,603-11,231,681 | - | C1H1g31043 | CX1g005606 | LOC_Os01g22920 | Os01g0332200 | GA2OX2, OsGA2ox2, ga2ox 2, OsGA2ox-2 | Detail |
| C2H1g25435 | 1:11,240,638-11,243,293 | + | C1H1g25028 | CX1g006261 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| C2H1g11384 | 1:11,248,919-11,254,259 | + | C1H1g00421 | CX1g005436 | LOC_Os01g22954 | Os01g0332500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |