| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g13230 | 3:2,418,388-2,421,481 | - | C2H3g27191 | CX3g027575 | LOC_Os03g05520 | Os03g0149200 | - | Detail |
| C1H3g28897 | 3:2,427,257-2,429,725 | - | C2H3g02809 | CX3g026711 | LOC_Os03g05530 | Os03g0149300 | - | Detail |
| C1H3g27908 | 3:2,435,003-2,437,715 | + | C2H3g29786 | CX3g029578 | LOC_Os03g05540 | Os03g0149400 | - | Detail |
| C1H3g00677 | 3:2,440,791-2,441,338 | + | C2H3g29884 | - | - | - | - | Detail |
| C1H3g00185 | 3:2,446,118-2,447,044 | - | C2H3g01040 | CX3g030199 | LOC_Os03g05560 | Os03g0149700 | - | Detail |
| C1H3g00155 | 3:2,453,622-2,454,521 | - | C2H3g29045 | CX3g028233 | LOC_Os03g05570 | Os03g0149800 | - | Detail |
| C1H3g19498 | 3:2,470,321-2,470,746 | + | C2H3g13096 | CX3g030128 | LOC_Os03g05590 | Os03g0150200 | OsAP23 | Detail |
| C1H3g28178 | 3:2,472,952-2,474,577 | + | C2H3g29028 | CX3g030522 | LOC_Os03g05610 | Os03g0150500 | - | Detail |
| C1H3g29432 | 3:2,476,401-2,477,984 | - | C2H3g30077 | CX3g029750 | LOC_Os03g05620 | Os03g0150600 | - | Detail |
| C1H3g22703 | 3:2,480,135-2,480,416 | + | C2H3g00543 | - | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C1H3g31371 | 3:2,480,559-2,482,194 | + | C2H3g05251 | CX3g024968 | LOC_Os03g05630 | Os03g0150700 | - | Detail |
| C1H3g21603 | 3:2,490,304-2,490,628 | + | C2H3g19570 | - | - | Os03g0150700 | - | Detail |
| C1H3g04203 | 3:2,491,900-2,493,486 | - | C2H3g28429 | CX3g028575 | LOC_Os03g05640 | Os03g0150800 | PT2, OsPT2, PTH1-2, OsPht1;2 | Detail |
| C1H3g13409 | 3:2,498,020-2,503,081 | - | C2H3g24713 | CX3g030168 | LOC_Os03g05660 | Os03g0151100 | - | Detail |
| C1H3g18077 | 3:2,507,699-2,515,990 | + | C2H3g23634 | CX3g028756 | LOC_Os03g05680 | Os03g0151300 | Se14 | Detail |
| C1H3g12618 | 3:2,516,387-2,516,698 | - | C2H3g25123 | CX3g027574 | LOC_Os03g05700 | Os03g0151500 | - | Detail |
| C1H3g18071 | 3:2,518,486-2,519,169 | - | C2H3g19949 | CX3g029524 | LOC_Os03g05710 | Os03g0151600 | - | Detail |
| C1H3g05811 | 3:2,520,194-2,525,967 | + | C2H3g16820 | CX3g027544 | LOC_Os03g05720 | Os03g0151700 | - | Detail |
| C1H3g17815 | 3:2,526,507-2,530,776 | - | C2H3g19649 | CX3g029565 | LOC_Os03g05730 | Os03g0151800 | - | Detail |
| C1H3g19009 | 3:2,531,441-2,533,055 | - | - | - | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g02792 | 2:11,125,874-11,135,547 | + | C1H2g10206 | CX2g024477 | LOC_Os02g20930 | Os02g0313400 | API5, OsAPI5, Os API5 | Detail |
| C2H2g06452 | 2:11,143,594-11,144,939 | + | C1H2g19130 | CX2g019960 | LOC_Os02g20940 | - | - | Detail |
| C2H2g13271 | 2:11,147,702-11,156,634 | + | C1H2g28771 | CX2g020910 | LOC_Os02g20950 | Os02g0313500 | - | Detail |
| C2H2g05101 | 2:11,191,801-11,200,108 | - | C1H2g29061 | CX2g021978 | LOC_Os02g20970 | Os02g0313700 | - | Detail |
| C2H2g29986 | 2:11,221,560-11,222,061 | + | C1H2g20283 | - | LOC_Os02g21009 | Os02g0314300 | OsCAX1c | Detail |
| C2H2g01113 | 2:11,230,410-11,235,810 | + | C1H2g26465 | CX2g021327 | LOC_Os02g21009 | Os02g0314300 | OsCAX1c | Detail |
| C2H2g23047 | 2:11,238,714-11,241,339 | + | C1H2g08462 | - | - | - | - | Detail |
| C2H2g29409 | 2:11,295,754-11,297,675 | + | C1H2g09201 | CX2g020254 | LOC_Os02g21080 | - | - | Detail |
| C2H2g03883 | 2:11,302,170-11,302,797 | + | C1H2g25896 | CX2g019435 | - | - | - | Detail |
| C2H2g13919 | 2:11,307,603-11,308,492 | + | C1H2g25896 | CX2g019435 | - | - | - | Detail |
| C2H2g25086 | 2:11,309,038-11,309,604 | + | C1H2g25896 | CX2g019435 | - | - | - | Detail |
| C2H2g27263 | 2:11,310,084-11,310,731 | + | C1H2g25896 | CX2g019435 | - | - | - | Detail |
| C2H2g02026 | 2:11,332,091-11,336,649 | - | C1H2g06256 | CX2g022497 | LOC_Os02g21110 | Os02g0316200 | - | Detail |
| C2H2g13467 | 2:11,351,263-11,351,940 | + | C1H2g06611 | CX2g019116 | - | - | - | Detail |
| C2H2g12170 | 2:11,352,476-11,353,383 | + | C1H2g04384 | - | LOC_Os02g21185 | Os02g0316800 | - | Detail |
| C2H2g16690 | 2:11,355,542-11,362,106 | + | C1H2g15632 | CX2g019049 | LOC_Os02g21190 | Os02g0316900 | - | Detail |
| C2H2g25644 | 2:11,396,453-11,399,370 | - | C1H9g28426 | CX9g057886 | LOC_Os05g01900 | Os05g0109400 | - | Detail |
| C2H2g14602 | 2:11,438,668-11,441,398 | + | C1H2g31644 | CX2g019256 | LOC_Os02g21230 | Os02g0318200 | - | Detail |
| C2H2g29719 | 2:11,444,591-11,448,303 | - | C1H2g00520 | CX2g024653 | LOC_Os02g21240 | Os02g0317300 | - | Detail |
| C2H2g17061 | 2:11,453,232-11,457,541 | + | C1H2g08373 | CX2g023538 | LOC_Os02g21250 | Os02g0317400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |