| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19764 | 3:1,330,606-1,334,329 | - | C2H3g09637 | CX3g026825 | LOC_Os03g03470 | Os03g0126300 | - | Detail |
| C1H3g31582 | 3:1,335,457-1,336,167 | - | C2H3g01245 | CX3g030498 | LOC_Os03g03480 | Os03g0126450 | - | Detail |
| C1H3g28463 | 3:1,338,762-1,339,451 | + | C2H3g24889 | CX3g031250 | LOC_Os03g03490 | Os03g0126600 | - | Detail |
| C1H3g02888 | 3:1,341,626-1,342,499 | + | C2H3g03559 | CX3g026627 | LOC_Os03g03500 | Os03g0126700 | - | Detail |
| C1H3g13225 | 3:1,345,288-1,349,052 | - | C2H3g24408 | CX3g025902 | LOC_Os03g03510 | Os03g0126800 | CIPK9 | Detail |
| C1H3g17944 | 3:1,363,757-1,364,113 | - | C2H3g27173 | CX3g025296 | LOC_Os03g03520 | Os03g0126900 | - | Detail |
| C1H3g26030 | 3:1,366,868-1,368,510 | - | C2H3g18981 | CX3g025913 | LOC_Os03g03530 | Os03g0127000 | - | Detail |
| C1H3g10455 | 3:1,368,703-1,368,945 | + | C2H3g03780 | - | - | - | - | Detail |
| C1H3g07061 | 3:1,370,739-1,373,094 | - | C2H3g10836 | CX3g025702 | LOC_Os03g03540 | Os03g0624600 | - | Detail |
| C1H3g08724 | 3:1,391,370-1,393,759 | + | C2H3g05840 | CX3g026687 | LOC_Os03g03550 | Os03g0127500 | - | Detail |
| C1H3g30951 | 3:1,394,084-1,399,068 | - | C2H3g22731 | CX3g027794 | LOC_Os03g03560 | Os03g0127600 | - | Detail |
| C1H3g04194 | 3:1,401,840-1,405,188 | + | C2H3g10932 | CX3g029550 | LOC_Os03g03570 | Os03g0127700 | - | Detail |
| C1H3g21101 | 3:1,408,304-1,415,858 | - | C2H3g19343 | CX3g028222 | LOC_Os03g03590 | Os03g0127900 | - | Detail |
| C1H3g15997 | 3:1,419,564-1,420,769 | + | C2H3g04515 | CX3g029732 | LOC_Os03g03600 | Os03g0128000 | - | Detail |
| C1H3g11304 | 3:1,422,238-1,442,796 | - | C2H3g21656 | CX3g027243 | LOC_Os03g03610 | Os03g0128100 | - | Detail |
| C1H3g22245 | 3:1,447,989-1,448,556 | - | C2H3g11243 | CX3g025297 | LOC_Os03g03630 | Os03g0128300 | - | Detail |
| C1H3g27628 | 3:1,449,997-1,451,209 | - | C2H3g19615 | CX3g029085 | LOC_Os03g03640 | Os03g0128400 | - | Detail |
| C1H3g25549 | 3:1,452,071-1,455,805 | - | C2H3g24976 | CX3g029868 | LOC_Os03g03650 | Os03g0128500 | OsPolδ2 | Detail |
| C1H3g29800 | 3:1,467,042-1,471,416 | + | C2H3g12077 | CX3g027339 | LOC_Os03g03660 | Os03g0128700 | OsCPK7, OsCDPK13, OsCDPK1, OsCDPK11, OsCDPK12 | Detail |
| C1H3g05509 | 3:1,472,015-1,473,408 | - | C2H3g19950 | CX3g030927 | LOC_Os03g03670 | Os03g0128800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g30300 | 10:6,465,702-6,468,318 | - | C1H10g06176 | CX10g009123 | LOC_Os10g13810 | Os10g0205300 | OsGT43G | Detail |
| C2H10g24884 | 10:6,476,140-6,487,531 | + | C1H10g28762 | CX10g010656 | LOC_Os10g13830 | Os10g0205500 | - | Detail |
| C2H10g28507 | 10:6,528,726-6,529,649 | - | C1H10g18498 | CX10g010854 | LOC_Os10g13850 | Os10g0205700 | - | Detail |
| C2H10g02000 | 10:6,535,645-6,539,824 | + | C1H10g11316 | - | - | - | - | Detail |
| C2H10g17140 | 10:6,552,452-6,553,352 | + | C1H10g11393 | - | - | Os10g0477900 | - | Detail |
| C2H10g05164 | 10:6,556,733-6,557,493 | + | C1H10g18276 | CX10g010333 | LOC_Os10g13914 | Os10g0206500 | - | Detail |
| C2H10g15018 | 10:6,561,910-6,562,757 | + | C1H10g27854 | CX10g010333 | LOC_Os10g13914 | Os10g0206500 | - | Detail |
| C2H10g30191 | 10:6,596,341-6,602,197 | + | C1H10g18438 | CX10g010783 | LOC_Os10g13940 | Os10g0206800 | - | Detail |
| C2H10g26190 | 10:6,624,407-6,624,985 | + | C1H10g10902 | CX10g010462 | LOC_Os10g13970 | Os10g0336300 | - | Detail |
| C2H10g11614 | 10:6,625,234-6,627,165 | + | - | - | - | - | - | Detail |
| C2H10g21276 | 10:6,633,577-6,653,905 | + | - | CX10g007819 | - | - | - | Detail |
| C2H10g10351 | 10:6,659,726-6,660,824 | - | C1H10g28075 | CX10g008750 | LOC_Os10g14020 | Os10g0207500 | - | Detail |
| C2H10g07086 | 10:6,695,360-6,698,921 | - | C1H10g19814 | CX10g009646 | LOC_Os10g14050 | Os10g0207700 | - | Detail |
| C2H10g28064 | 10:6,715,848-6,718,369 | - | C1H10g22182 | CX10g008199 | LOC_Os10g14150 | Os10g0208200 | - | Detail |
| C2H10g23406 | 10:6,733,830-6,741,195 | + | C1H10g15523 | CX10g008106 | LOC_Os10g14180 | Os10g0208500 | - | Detail |
| C2H10g10383 | 10:6,742,640-6,742,909 | - | C1H10g30998 | CX10g008231 | LOC_Os10g14194 | Os10g0208600 | - | Detail |
| C2H10g13755 | 10:6,765,690-6,766,485 | + | C1H10g06226 | CX10g010832 | - | Os03g0857301 | - | Detail |
| C2H10g05603 | 10:6,790,387-6,791,927 | + | C1H10g01112 | CX10g007944 | LOC_Os10g14814 | Os10g0209300 | - | Detail |
| C2H10g07499 | 10:6,802,692-6,803,117 | - | C1H10g30373 | CX10g010375 | LOC_Os10g14800 | - | - | Detail |
| C2H10g14080 | 10:6,806,679-6,807,230 | + | C1H11g03089 | CX11g014963 | LOC_Os10g38570 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |