| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g14139 | 3:1,196,798-1,202,229 | + | C2H3g00396 | CX3g026340 | LOC_Os03g03164 | Os03g0123500 | HOS66, HOS66S | Detail |
| C1H3g07667 | 3:1,203,310-1,206,470 | - | C2H3g00632 | CX3g027409 | LOC_Os03g03180 | Os03g0123600 | - | Detail |
| C1H3g01390 | 3:1,209,436-1,210,395 | - | C2H3g19198 | CX3g025593 | LOC_Os11g34910 | Os11g0550300 | - | Detail |
| C1H3g08918 | 3:1,214,219-1,216,013 | + | C2H3g13822 | CX3g025457 | LOC_Os03g03200 | Os03g0123800 | - | Detail |
| C1H3g08025 | 3:1,217,866-1,218,564 | + | C2H3g17363 | CX3g029809 | LOC_Os02g13020 | - | - | Detail |
| C1H3g22053 | 3:1,227,572-1,233,489 | + | C2H3g11416 | CX3g025586 | LOC_Os03g03260 | Os03g0124000 | OsHB22 | Detail |
| C1H3g12842 | 3:1,236,142-1,237,813 | + | C2H3g23812 | CX3g029945 | LOC_Os03g03270 | Os03g0124100 | - | Detail |
| C1H3g06423 | 3:1,239,734-1,242,415 | + | C2H3g17495 | CX3g029915 | LOC_Os03g03280 | Os03g0124200 | - | Detail |
| C1H3g21157 | 3:1,243,927-1,245,327 | + | C2H3g27072 | CX3g027531 | LOC_Os03g03290 | Os03g0124300 | - | Detail |
| C1H3g07613 | 3:1,252,329-1,253,207 | + | C2H3g24607 | CX3g026326 | LOC_Os03g03320 | Os03g0124500 | - | Detail |
| C1H3g04841 | 3:1,262,744-1,265,831 | + | C2H3g11584 | CX3g030707 | LOC_Os03g03350 | Os03g0124900 | OsPG1 | Detail |
| C1H3g23961 | 3:1,265,828-1,267,359 | - | C2H3g17248 | CX3g028338 | LOC_Os03g03360 | Os03g0125000 | - | Detail |
| C1H3g31110 | 3:1,268,721-1,271,134 | - | C2H3g15002 | CX3g029957 | LOC_Os03g03370 | Os03g0125100 | DSM2, OsBCH1, OsHYD3 | Detail |
| C1H3g17673 | 3:1,276,687-1,284,038 | + | C2H3g15732 | CX3g026725 | LOC_Os03g03390 | Os03g0125300 | - | Detail |
| C1H3g28194 | 3:1,288,411-1,292,930 | + | C2H3g14454 | CX3g029384 | LOC_Os03g03410 | Os03g0125600 | - | Detail |
| C1H3g27909 | 3:1,296,454-1,299,299 | - | C2H3g24007 | CX3g031344 | LOC_Os03g03420 | Os03g0125700 | - | Detail |
| C1H3g30116 | 3:1,307,476-1,313,029 | + | C2H3g15544 | CX3g029108 | LOC_Os03g03430 | Os03g0125800 | - | Detail |
| C1H3g10403 | 3:1,314,001-1,315,563 | + | C2H3g23265 | CX3g027007 | LOC_Os03g03440 | Os03g0125900 | - | Detail |
| C1H3g12126 | 3:1,315,772-1,320,424 | - | C2H3g03318 | CX3g030160 | LOC_Os03g03450 | Os03g0126000 | - | Detail |
| C1H3g18852 | 3:1,324,184-1,329,044 | - | C2H3g01117 | CX3g027762 | LOC_Os03g03460 | Os03g0126100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g20148 | 12:2,346,213-2,347,171 | - | C1H12g08468 | CX12g017701 | LOC_Os12g05590 | Os12g0152000 | Oscen1, FDR1, RCN3, Oscen1/ FDR1 | Detail |
| C2H12g12457 | 12:2,353,108-2,354,902 | + | C1H12g07729 | CX12g018389 | LOC_Os12g05600 | Os12g0152100 | - | Detail |
| C2H12g13362 | 12:2,370,479-2,371,492 | + | C1H12g30150 | CX12g018389 | LOC_Os12g05630 | Os12g0152500 | - | Detail |
| C2H12g01708 | 12:2,374,830-2,376,992 | - | C1H12g00663 | CX12g017206 | LOC_Os12g05640 | Os12g0152600 | - | Detail |
| C2H12g04327 | 12:2,377,972-2,382,548 | - | C1H12g14242 | CX12g016024 | LOC_Os12g05650 | Os12g0152700 | - | Detail |
| C2H12g22774 | 12:2,389,532-2,394,305 | + | C1H12g29017 | CX12g017584 | LOC_Os12g05660 | Os12g0152800 | - | Detail |
| C2H12g08928 | 12:2,392,365-2,399,334 | - | C1H12g28763 | CX12g016609 | LOC_Os12g05680 | Os12g0152900 | OsbZIP83, TGAL11 | Detail |
| C2H12g05776 | 12:2,433,938-2,434,860 | + | C1H12g29526 | CX12g016099 | LOC_Os12g05730 | Os12g0153500 | - | Detail |
| C2H12g00041 | 12:2,437,797-2,440,161 | + | C1H12g08598 | CX12g015296 | LOC_Os12g05740 | Os12g0153600 | - | Detail |
| C2H12g09749 | 12:2,454,474-2,458,147 | - | C1H12g02157 | CX12g017479 | LOC_Os12g05780 | Os12g0154600 | - | Detail |
| C2H12g04677 | 12:2,461,576-2,464,256 | + | C1H12g30827 | CX12g017672 | LOC_Os12g05810 | Os12g0154400 | - | Detail |
| C2H12g18141 | 12:2,466,115-2,469,408 | + | C1H12g29174 | CX12g018561 | LOC_Os12g05830 | Os12g0154600 | - | Detail |
| C2H12g12501 | 12:2,470,530-2,471,338 | - | C1H12g23452 | CX12g018459 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C2H12g27455 | 12:2,474,199-2,476,949 | - | C1H12g24006 | CX12g017127 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C2H12g23733 | 12:2,477,950-2,478,757 | - | C1H12g18669 | CX12g015507 | LOC_Os12g05870 | Os12g0154900 | GLP12-3, GLP12-1, OsGLP12-3 | Detail |
| C2H12g06783 | 12:2,480,983-2,481,783 | - | C1H12g28017 | CX12g017127 | LOC_Os12g05860 | Os12g0154800 | GLP12-2, OsGLP12-2 | Detail |
| C2H12g30495 | 12:2,488,547-2,489,374 | - | C1H12g20880 | CX11g013134 | LOC_Os12g05890 | Os12g0155100 | - | Detail |
| C2H12g28920 | 12:2,491,389-2,496,848 | - | C1H12g14419 | CX12g015199 | LOC_Os12g05900 | Os12g0155200 | - | Detail |
| C2H12g08033 | 12:2,506,455-2,513,021 | + | C1H12g09556 | CX12g016405 | LOC_Os12g05920 | Os12g0155300 | - | Detail |
| C2H12g30008 | 12:2,541,475-2,544,415 | + | C1H12g13408 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |